RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 ZNF20P17024 532 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 AGXTP21549 392 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 BRCC3P46736 316 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 DEFA6Q01524 100 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 GSTM4Q03013 218 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 SF3A2Q15428 464 aaKnown RBP13.2□□□□□ -0.3
DDX3X-201ENST00000399959 ZNF648Q5T619 568 aaPredicted RBP13.2□□□□□ -0.3
DDX3X-201ENST00000399959 FAM46CQ5VWP2 391 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 C3P1Q6ZMU1 363 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 Q8N9G6 341 aaPredicted RBP13.2□□□□□ -0.3
DDX3X-201ENST00000399959 PROKR2Q8NFJ6 384 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 CNOT9Q92600 299 aaKnown RBP13.2□□□□□ -0.3
DDX3X-201ENST00000399959 MOCOSQ96EN8 888 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 RANBP9Q96S59 729 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 RANGRFQ9HD47 186 aaPredicted RBP13.2□□□□□ -0.3
DDX3X-201ENST00000399959 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 A0A0G2JMP0 313 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 TSTD3H0UI37 97 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 TXNL1O43396 289 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 FMO6PO60774 539 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 HOXC6P09630 235 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 SMIM10L2AP0DMW4 78 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 SMIM10L2BP0DMW5 78 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 PTPN6P29350 595 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 SCNN1AP37088 669 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 FKBP1AP62942 108 aaKnown RBP13.2□□□□□ -0.3
DDX3X-201ENST00000399959 NOMO2Q5JPE7 1267 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 NAPRTQ6XQN6 538 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 C15orf52Q6ZUT6 534 aaKnown RBP13.2□□□□□ -0.3
DDX3X-201ENST00000399959 OR4M2Q8NGB6 313 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 GNPDA2Q8TDQ7 276 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 FRS2Q8WU20 508 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 PIP5K1AQ99755 562 aa13.2□□□□□ -0.3
DDX3X-201ENST00000399959 TRAV19A0A0A6YYK7 116 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 ATP6V1G2-DDX39BF2Z307 99 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 J3KR12 359 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 B4GAT1O43505 415 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 TLE2Q04725 743 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 PPIGQ13427 754 aaKnown RBP eCLIP13.19□□□□□ -0.35e-7■■□□□ 12.7
DDX3X-201ENST00000399959 RAB11FIP2Q7L804 512 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 PARGQ86W56 976 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 GID4Q8IVV7 300 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 METTL4Q8N3J2 472 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 RAD9AQ99638 391 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 NAA50Q9GZZ1 169 aaKnown RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 NTN4Q9HB63 628 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 DUXAA6NLW8 204 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 YJEFN3A6XGL0 299 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 B3GALNT1O75752 331 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 CAPN3P20807 821 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 PRKXP51817 358 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 GRIK2Q13002 908 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 GRM2Q14416 872 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 PROX2Q3B8N5 592 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 NDUFAF5Q5TEU4 345 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 CRTC1Q6UUV9 634 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 MBOAT1Q6ZNC8 495 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 WDR53Q7Z5U6 358 aaPredicted RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 NR4A3Q92570 626 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 SECISBP2Q96T21 854 aaKnown RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 YIPF4Q9BSR8 244 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 TEX10Q9NXF1 929 aaPredicted RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 CD84Q9UIB8 345 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 CAPN15O75808 1086 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 AP1S1P61966 158 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 RASGEF1BQ0VAM2 473 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 TAF10Q12962 218 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 TUBB3Q13509 450 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 LRP8Q14114 963 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 PAFAH1B3Q15102 231 aaKnown RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 PLEKHN1Q494U1 663 aaPredicted RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 DACT2Q5SW24 774 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 ATXN7L2Q5T6C5 722 aaPredicted RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 GDPGP1Q6ZNW5 385 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 CD180Q99467 661 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 MROQ9BYG7 248 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 POTEKPQ9BYX7 375 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 OR51J1Q9H342 316 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 SOHLH2Q9NX45 425 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 MRPL15Q9P015 296 aaKnown RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 RNF11Q9Y3C5 154 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 UGT2A1Q9Y4X1 527 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 FAAHO00519 579 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 FUCA1P04066 466 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 ALDOBP05062 364 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 RETP07949 1114 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 HTR1AP08908 422 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 CFL1P23528 166 aaKnown RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 CCND3P30281 292 aaPredicted RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 HOXD13P35453 343 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 ETV4P43268 484 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 ILF3Q12906 894 aaKnown RBP eCLIP13.19□□□□□ -0.31e-8■■■□□ 17.3
DDX3X-201ENST00000399959 ESX1Q8N693 406 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 BEST4Q8NFU0 473 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 FCRL3Q96P31 734 aaPredicted RBP13.19□□□□□ -0.3
DDX3X-201ENST00000399959 PBDC1Q9BVG4 233 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 AGPAT4Q9NRZ5 378 aa13.19□□□□□ -0.3
DDX3X-201ENST00000399959 A0A1B0GVM2 712 aa13.18□□□□□ -0.3
DDX3X-201ENST00000399959 C1QTNF3-AMACRE9PGA6 284 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms