RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ABRAXAS2Q15018 415 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 KDELC1Q6UW63 502 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 ZNF438Q7Z4V0 828 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 TMEM80Q96HE8 168 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 SLITRK2Q9H156 845 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 ARPC4-TTLL3A0A0A6YYG9 625 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 EIF3FO00303 357 aaPredicted RBP14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 GPR39O43194 453 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 CPNE6O95741 557 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 PLATP00750 562 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 APOC3P02656 99 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 CAPNS1P04632 268 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 CLCN4P51793 760 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 DUOXA1Q1HG43 343 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 RFTN2Q52LD8 501 aaPredicted RBP14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 RAB41Q5JT25 222 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 CAPN13Q6MZZ7 669 aaPredicted RBP14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 MRPL10Q7Z7H8 261 aaKnown RBP14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 COMMD7Q86VX2 200 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 RGL4Q8IZJ4 473 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 YIPF7Q8N8F6 280 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 SRFBP1Q8NEF9 429 aaKnown RBP14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 OR52L1Q8NGH7 329 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 CYB5D2Q8WUJ1 264 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 KCNJ9Q92806 393 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 TTLL2Q9BWV7 592 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 TMEM30AQ9NV96 361 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 MGAT4AQ9UM21 535 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 SLC35F4A4IF30 521 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 H7C2Y5 167 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 QSOX1O00391 747 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 STC2O76061 302 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 NAT1P18440 290 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 RPL3P39023 403 aaKnown RBP14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 STK19P49842 368 aaPredicted RBP14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 RING1Q06587 406 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 SCARB2Q14108 478 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 SELPLGQ14242 412 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 LRRC26Q2I0M4 334 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 TMCO2Q7Z6W1 182 aaPredicted RBP14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 CHPFQ8IZ52 775 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 GPR151Q8TDV0 419 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 NECTIN4Q96NY8 510 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 ABCG5Q9H222 651 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 KCNN2Q9H2S1 579 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 HCN4Q9Y3Q4 1203 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 PCDHA9Q9Y5H5 950 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 USP3Q9Y6I4 520 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 ZNF840PA6NDX5 716 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 MANBAO00462 879 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 AXIN1O15169 862 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 MSL3P1P0C860 447 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 PIM1P11309 404 aaPredicted RBP14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 KIAA1161Q6NSJ0 714 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 MBOAT1Q6ZNC8 495 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 CSNK1G1Q9HCP0 422 aa14.07□□□□□ -0.16
RPRD1A-202ENST00000399022 M0R129 80 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 INPPL1O15357 1258 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 PFKLP17858 780 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 TAS2R41P59536 307 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 C18orf21Q32NC0 220 aaPredicted RBP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 PTCHD3Q3KNS1 767 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 CRB2Q5IJ48 1285 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 TNFAIP8L2Q6P589 184 aaPredicted RBP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 PELI3Q8N2H9 469 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 OR5AK3PQ8NH89 298 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 COQ8AQ8NI60 647 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 KCNH6Q9H252 994 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 RHBGQ9H310 441 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 RUVBL1Q9Y265 456 aaKnown RBP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 MICAL3Q7RTP6 2002 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 TRBC2A0A5B9 178 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 LCN1P31025 176 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 EVI2BP34910 448 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 POU4F3Q15319 338 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 ZMYND11Q15326 602 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 TPGS2Q68CL5 300 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 PLCZ1Q86YW0 608 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 FAM46DQ8NEK8 389 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 PCNPQ8WW12 178 aaKnown RBP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 MRPL48Q96GC5 212 aaKnown RBP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 EXTL2Q9UBQ6 330 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 BCKDHAP12694 445 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 EFR3AQ14156 821 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 CBX2Q14781 532 aaPredicted RBP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 GPR33Q49SQ1 333 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 HSD17B12Q53GQ0 312 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 ZNF730Q6ZMV8 503 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 GET4Q7L5D6 327 aaPredicted RBP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 SETD6Q8TBK2 473 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 TIFAQ96CG3 184 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 PPP1R16AQ96I34 528 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 FAM129BQ96TA1 746 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 MAGIXQ9H6Y5 334 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 RANBP3Q9H6Z4 567 aaPredicted RBP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 IMP3Q9NV31 184 aaKnown RBP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 MED11Q9P086 117 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 AKAP7Q9P0M2 348 aaPredicted RBP14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 PLCL2Q9UPR0 1127 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms