RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 TMED5Q9Y3A6 229 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 IGHV1OR21-1A0A087WYE8 117 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 OR2A25A4D2G3 310 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 SLC22A2O15244 555 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 CAPN5O15484 640 aaPredicted RBP12.61□□□□□ -0.39
SEC13-209ENST00000397117 LCMT2O60294 686 aaKnown RBP12.61□□□□□ -0.39
SEC13-209ENST00000397117 CPNE6O95741 557 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 ADSLP30566 484 aaPredicted RBP12.61□□□□□ -0.39
SEC13-209ENST00000397117 AHRP35869 848 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 BCL6P41182 706 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 DIO3P55073 304 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 PPP1CAP62136 330 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 ACSM2AQ08AH3 577 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 NR1D2Q14995 579 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 KRT72Q14CN4 511 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 CLPPQ16740 277 aaPredicted RBP12.61□□□□□ -0.39
SEC13-209ENST00000397117 AMZ1Q400G9 498 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 RFTN2Q52LD8 501 aaPredicted RBP12.61□□□□□ -0.39
SEC13-209ENST00000397117 LACTB2Q53H82 288 aaPredicted RBP12.61□□□□□ -0.39
SEC13-209ENST00000397117 SPIN4Q56A73 249 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 IL23RQ5VWK5 629 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 NKAIN2Q5VXU1 208 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 FAM91A1Q658Y4 838 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 ACSM2BQ68CK6 577 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 MFSD9Q8NBP5 474 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 TRPV3Q8NET8 790 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 METTL2AQ96IZ6 378 aaKnown RBP12.61□□□□□ -0.39
SEC13-209ENST00000397117 TGM7Q96PF1 710 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 TAAR9Q96RI9 348 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 SARGQ9BW04 601 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 KLHL25Q9H0H3 589 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 OR51B5Q9H339 312 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 PPT2Q9UMR5 302 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 POLR3HQ9Y535 204 aaPredicted RBP12.61□□□□□ -0.39
SEC13-209ENST00000397117 PCDHGA3Q9Y5H0 932 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 KLK4Q9Y5K2 254 aa12.61□□□□□ -0.39
SEC13-209ENST00000397117 CLEC18AA5D8T8 446 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 CAPN14A8MX76 684 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 NPIPB8E9PQR5 432 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 STMND1H3BQB6 276 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 PSMD12O00232 456 aaPredicted RBP12.6□□□□□ -0.39
SEC13-209ENST00000397117 MAP3K7O43318 606 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 NRP2O60462 931 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 CLEC3AO75596 197 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 ETHE1O95571 254 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 PVRP15151 417 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 KLF10Q13118 480 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 FCRL6Q6DN72 434 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 BORAQ6PGQ7 559 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 CLEC18BQ6UXF7 455 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 FAM92BQ6ZTR7 304 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 VN1R5Q7Z5H4 357 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 PTRH1Q86Y79 214 aaKnown RBP12.6□□□□□ -0.39
SEC13-209ENST00000397117 PLXDC1Q8IUK5 500 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 CLEC18CQ8NCF0 446 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 CMTM5Q96DZ9 223 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 APIPQ96GX9 242 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 PPM1MQ96MI6 270 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 MRPL1Q9BYD6 325 aaKnown RBP12.6□□□□□ -0.39
SEC13-209ENST00000397117 RAB33BQ9H082 229 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 ZNF385DQ9H6B1 395 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 C1GALT1Q9NS00 363 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 AIG1Q9NVV5 245 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 AHSPQ9NZD4 102 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 AKAP7Q9P0M2 348 aaPredicted RBP12.6□□□□□ -0.39
SEC13-209ENST00000397117 EPHA6Q9UF33 1036 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 AP1M2Q9Y6Q5 423 aa12.6□□□□□ -0.39
SEC13-209ENST00000397117 IGHV5-10-1A0A0J9YXX1 117 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 NDUFS4O43181 175 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 RASSF9O75901 435 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 PIK3R1P27986 724 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 CD1CP29017 333 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 RAP1GDS1P52306 607 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 NME5P56597 212 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 RELAQ04206 551 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 KCNAB2Q13303 367 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 CUL3Q13618 768 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 SPRED3Q2MJR0 410 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 KHDRBS2Q5VWX1 349 aaKnown RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 TREML1Q86YW5 311 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 FAM9CQ8IZT9 166 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 LIX1Q8N485 282 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 C1orf52Q8N6N3 182 aaKnown RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 PMEPA1Q969W9 287 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 RERGQ96A58 199 aaPredicted RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 THAP11Q96EK4 314 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 NSL1Q96IY1 281 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 CD180Q99467 661 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 ZFYVE21Q9BQ24 234 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 NUDT22Q9BRQ3 303 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 MS4A8Q9BY19 250 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 BRINP2Q9C0B6 783 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 SDR39U1Q9NRG7 319 aaPredicted RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 TXLNGQ9NUQ3 528 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 ASIC5Q9NY37 505 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 TUBD1Q9UJT1 453 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 RUVBL1Q9Y265 456 aaKnown RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 GPR45Q9Y5Y3 372 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 TEX15Q9BXT5 2789 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 A0A0J9YVX5 310 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms