RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 SYT16Q17RD7 645 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 PRTGQ2VWP7 1150 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 FAM214AQ32MH5 1076 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 CFAP157Q5JU67 520 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 CDKL4Q5MAI5 379 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 B3GNTL1Q67FW5 361 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-202ENST00000396828 FAAH2Q6GMR7 532 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 SULT1C3Q6IMI6 304 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 ISLR2Q6UXK2 745 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 RGS9BPQ6ZS82 235 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 TCAIMQ8N3R3 496 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 ARHGEF39Q8N4T4 335 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 SIRT6Q8N6T7 355 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 AMER3Q8N944 861 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 PPFIBP2Q8ND30 876 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 OR1N1Q8NGS0 311 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 BRIX1Q8TDN6 353 aaKnown RBP9.79□□□□□ -0.84
NEDD8-202ENST00000396828 ZNF75CPQ92670 426 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-202ENST00000396828 MIEF2Q96C03 454 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 SLX1AQ9BQ83 275 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 ARL15Q9NXU5 204 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 UTP6Q9NYH9 597 aaKnown RBP9.79□□□□□ -0.84
NEDD8-202ENST00000396828 PTGFRNQ9P2B2 879 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 ZNF282Q9UDV7 671 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-202ENST00000396828 IKZF3Q9UKT9 509 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 RUVBL1Q9Y265 456 aaKnown RBP9.79□□□□□ -0.84
NEDD8-202ENST00000396828 TNPO3Q9Y5L0 923 aaKnown RBP9.79□□□□□ -0.84
NEDD8-202ENST00000396828 CPAMD8Q8IZJ3 1885 aa9.79□□□□□ -0.84
NEDD8-202ENST00000396828 TMEM114B3SHH9 223 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 STX16-NPEPL1H3BU86 382 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 STX16O14662 325 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 P2RX6O15547 441 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 FOXS1O43638 330 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 KLK8O60259 260 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 SNUPNO95149 360 aaKnown RBP9.78□□□□□ -0.84
NEDD8-202ENST00000396828 GUCA1CO95843 209 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 HPP00738 406 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 VIMP08670 466 aaKnown RBP9.78□□□□□ -0.84
NEDD8-202ENST00000396828 PRR35P0CG20 571 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 ERGP11308 486 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 ACPPP15309 386 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 IMPDH1P20839 514 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 SERPINB5P36952 375 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 HNMTP50135 292 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 TDGF1P3P51864 188 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 KCNK10P57789 538 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 HERVK_113P63132 956 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 MAT1AQ00266 395 aaKnown RBP9.78□□□□□ -0.84
NEDD8-202ENST00000396828 STX3Q13277 289 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 TLR1Q15399 786 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 ZRSR2Q15696 482 aaKnown RBP9.78□□□□□ -0.84
NEDD8-202ENST00000396828 PHKG1Q16816 387 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 ZNF324BQ6AW86 544 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-202ENST00000396828 FJX1Q86VR8 437 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 PAQR7Q86WK9 346 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 TICAM1Q8IUC6 712 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 PLD3Q8IV08 490 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 RAB42Q8N4Z0 105 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 PTGR2Q8N8N7 351 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-202ENST00000396828 PDPRQ8NCN5 879 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 FBXO15Q8NCQ5 510 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-202ENST00000396828 OR9A1PQ8NGU1 263 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 ATL1Q8WXF7 558 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 PHF21BQ96EK2 531 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 L3HYPDHQ96EM0 354 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 CHMP6Q96FZ7 201 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 CCDC138Q96M89 665 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 OR2A5Q96R48 311 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 LMF1Q96S06 567 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 PKP4Q99569 1192 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 ZFYVE21Q9BQ24 234 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 RAB11FIP5Q9BXF6 653 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 ERVK-6Q9BXR3 956 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 NSRP1Q9H0G5 558 aaKnown RBP9.78□□□□□ -0.84
NEDD8-202ENST00000396828 EPS8L2Q9H6S3 715 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 NXT1Q9UKK6 140 aaKnown RBP9.78□□□□□ -0.84
NEDD8-202ENST00000396828 PDE10AQ9Y233 779 aa9.78□□□□□ -0.84
NEDD8-202ENST00000396828 MRPS2Q9Y399 296 aaKnown RBP9.78□□□□□ -0.84
NEDD8-202ENST00000396828 MYO7BQ6PIF6 2116 aa9.77□□□□□ -0.84
NEDD8-202ENST00000396828 IGHV1-45A0A0A0MS14 117 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 GMNCA6NCL1 334 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 OR2W5A6NFC9 320 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 IDSB3KWA1 339 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 NPHS1O60500 1241 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 SHOX2O60902 331 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-202ENST00000396828 JRKO75564 520 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 FKBP9O95302 570 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 HSPA4LO95757 839 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 ITGAMP11215 1152 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 MTHFD2P13995 350 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 FBLP22087 321 aaKnown RBP9.77□□□□□ -0.85
NEDD8-202ENST00000396828 SOX11P35716 441 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 ST13P50502 369 aaKnown RBP9.77□□□□□ -0.85
NEDD8-202ENST00000396828 TNFSF10P50591 281 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 NAGLUP54802 743 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 EMP2P54851 167 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 OCA2Q04671 838 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 TSTA3Q13630 321 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-202ENST00000396828 DSG2Q14126 1118 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 SETDB1Q15047 1291 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms