RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MAN2B2Q9Y2E5 1009 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 PCDHGA11Q9Y5H2 935 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 KCNMB2Q9Y691 235 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 IGSF10Q6WRI0 2623 aa15.64■□□□□ 0.1
CXCL1-201ENST00000395761 ARGFXA6NJG6 315 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 MASP2O00187 686 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 SAP18O00422 153 aaKnown RBP15.64■□□□□ 0.09
CXCL1-201ENST00000395761 OTCP00480 354 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 NR1D1P20393 614 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 MMP11P24347 488 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 SERPINB1P30740 379 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 PIK3CBP42338 1070 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 WDR4P57081 412 aaKnown RBP15.64■□□□□ 0.09
CXCL1-201ENST00000395761 RPS13P62277 151 aaKnown RBP15.64■□□□□ 0.09
CXCL1-201ENST00000395761 RUNX2Q13950 521 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 CPZQ66K79 652 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 LETMD1Q6P1Q0 360 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 ABHD17CQ6PCB6 329 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 RAB43Q86YS6 212 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 ARFGAP2Q8N6H7 521 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 OR2L5Q8NG80 312 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 WDR20Q8TBZ3 569 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 APOBEC4Q8WW27 367 aaKnown RBP15.64■□□□□ 0.09
CXCL1-201ENST00000395761 THAP4Q8WY91 577 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 PEX11GQ96HA9 241 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 FAR2Q96K12 515 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 CRB3Q9BUF7 120 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 RBCK1Q9BYM8 510 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 GSTO2Q9H4Y5 243 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 DMRT3Q9NQL9 472 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 PRDM7Q9NQW5 492 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 OXSMQ9NWU1 459 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 ADGRE2Q9UHX3 823 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 TSC22D4Q9Y3Q8 395 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 HS3ST3B1Q9Y662 390 aa15.64■□□□□ 0.09
CXCL1-201ENST00000395761 MAGEB17A8MXT2 336 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 IDSB3KWA1 339 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 ERVH48-1M5A8F1 160 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 RTCAO00442 366 aaKnown RBP15.63■□□□□ 0.09
CXCL1-201ENST00000395761 SOCS6O14544 535 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 BIRC5O15392 142 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 OR4F21O95013 312 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 FAM87AP0C7U9 286 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 CCR10P46092 362 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 NAGLUP54802 743 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 EMP2P54851 167 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 DNAJB13P59910 316 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 CHAF1BQ13112 559 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 PCLAFQ15004 111 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 GGTA1PQ4G0N0 100 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 SGO1Q5FBB7 561 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 FAAH2Q6GMR7 532 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 KIRREL2Q6UWL6 708 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 C10orf107Q8IVU9 208 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 EXD3Q8N9H8 876 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 REPS1Q96D71 796 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 CMTM7Q96FZ5 175 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 BBC3Q96PG8 261 aaPredicted RBP15.63■□□□□ 0.09
CXCL1-201ENST00000395761 ZNF382Q96SR6 550 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 SORBS1Q9BX66 1292 aaKnown RBP15.63■□□□□ 0.09
CXCL1-201ENST00000395761 TRIM55Q9BYV6 548 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 SEMA3GQ9NS98 782 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 C14orf105Q9NVL8 296 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 P4HTMQ9NXG6 502 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 MKL2Q9ULH7 1088 aa15.63■□□□□ 0.09
CXCL1-201ENST00000395761 FAM227AF5H4B4 570 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 UBFD1O14562 309 aaKnown RBP15.62■□□□□ 0.09
CXCL1-201ENST00000395761 CDC123O75794 336 aaPredicted RBP15.62■□□□□ 0.09
CXCL1-201ENST00000395761 DNAJB5O75953 348 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 ETHE1O95571 254 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 HEXBP07686 556 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 BPGMP07738 259 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 CERS1P27544 350 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 SERPINB4P48594 390 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 POLE2P56282 527 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 SKP1P63208 163 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 TMEM35AQ53FP2 167 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 TCHHL1Q5QJ38 904 aaPredicted RBP15.62■□□□□ 0.09
CXCL1-201ENST00000395761 DEPDC1Q5TB30 811 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 KHDRBS2Q5VWX1 349 aaKnown RBP15.62■□□□□ 0.09
CXCL1-201ENST00000395761 FRG2Q64ET8 278 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 TTC19Q6DKK2 380 aaPredicted RBP15.62■□□□□ 0.09
CXCL1-201ENST00000395761 NIPAL1Q6NVV3 410 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 TRIM40Q6P9F5 258 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 ZNF793Q6ZN11 406 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 CHSY3Q70JA7 882 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 CA13Q8N1Q1 262 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 CDYL2Q8N8U2 506 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 ANKRD42Q8N9B4 389 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 C8orf44Q96CB5 159 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 FRG2BQ96QU4 278 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 UBL7Q96S82 380 aaPredicted RBP15.62■□□□□ 0.09
CXCL1-201ENST00000395761 VN1R1Q9GZP7 353 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 LANCL2Q9NS86 450 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 FARSBQ9NSD9 589 aaKnown RBP15.62■□□□□ 0.09
CXCL1-201ENST00000395761 CACNA1GO43497 2377 aa15.62■□□□□ 0.09
CXCL1-201ENST00000395761 FOXE1O00358 373 aaPredicted RBP15.61■□□□□ 0.09
CXCL1-201ENST00000395761 PEX12O00623 359 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 TRIM13O60858 407 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 B4GALT2O60909 372 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms