RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 GNG2P59768 71 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 MEF2AQ02078 507 aaPredicted RBP13.74□□□□□ -0.21
CLIP2-203ENST00000395060 CCSMST1Q4G0I0 132 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 RPS26P11Q5JNZ5 115 aaPredicted RBP13.74□□□□□ -0.21
CLIP2-203ENST00000395060 CXorf57Q6NSI4 855 aaKnown RBP13.74□□□□□ -0.21
CLIP2-203ENST00000395060 APCDD1Q8J025 514 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 MMP21Q8N119 569 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 ZNF557Q8N988 423 aaPredicted RBP13.74□□□□□ -0.21
CLIP2-203ENST00000395060 C11orf65Q8NCR3 313 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 TESCQ96BS2 214 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 RNF31Q96EP0 1072 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 SNX18Q96RF0 628 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 EPYCQ99645 322 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 GABARAPL3Q9BY60 117 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 NXF2Q9GZY0 626 aaKnown RBP13.74□□□□□ -0.21
CLIP2-203ENST00000395060 HHATLQ9HCP6 504 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 LHX3Q9UBR4 397 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 AP3M1Q9Y2T2 418 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 V9GYH0 126 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 A0A0G2JMP0 313 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 SH3BP5O60239 455 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 CLDN11O75508 207 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 GADD45GO95257 159 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 ATF6P18850 670 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 TNNI3P19429 210 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 CHMP24386 653 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 TIE1P35590 1138 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 TAF12Q16514 161 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 GPAT3Q53EU6 434 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 RTP2Q5QGT7 225 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 SDE2Q6IQ49 451 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 SZRD1Q7Z422 152 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 LILRA3Q8N6C8 439 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-203ENST00000395060 OR5H6Q8NGV6 325 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 ENKURQ8TC29 256 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 SAMD11Q96NU1 681 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 TMEM161AQ9NX61 479 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 CRNNQ9UBG3 495 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-203ENST00000395060 VPS29Q9UBQ0 182 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 ZNF623O75123 536 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 ALX3O95076 343 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 MAPK1P28482 360 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 PBLDP30039 288 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-203ENST00000395060 HBA1P69905 142 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 NAE1Q13564 534 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 CDH18Q13634 790 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 MICAQ29983 383 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 POM121L1PQ3SYA9 428 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 CERS6Q6ZMG9 384 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 TPGS1Q6ZTW0 290 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 OLIG3Q7RTU3 272 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 TMEM173Q86WV6 379 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-203ENST00000395060 SLC38A6Q8IZM9 456 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 SYNPOQ8N3V7 929 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 C2orf73Q8N5S3 287 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-203ENST00000395060 YIPF7Q8N8F6 280 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 OTUB1Q96FW1 271 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-203ENST00000395060 COQ7Q99807 217 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 CLN6Q9NWW5 311 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 SLC35F4A4IF30 521 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 NPIPB15A6NHN6 443 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-203ENST00000395060 TBKBP1A7MCY6 615 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 ADAMDEC1O15204 470 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 TNFRSF21O75509 655 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 OAZ2O95190 189 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 SELENOWP63302 87 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 OLR1P78380 273 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 BCL2L1Q07817 233 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 ZNF385BQ569K4 471 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 OTOP2Q7RTS6 562 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 RNF130Q86XS8 419 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 SLC7A6Q92536 515 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 RNF186Q9NXI6 227 aa13.73□□□□□ -0.21
CLIP2-203ENST00000395060 GBF1Q92538 1859 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 STC2O76061 302 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 IL1RNP18510 177 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 PTNP21246 168 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 CD72P21854 359 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 APEX1P27695 318 aaKnown RBP13.72□□□□□ -0.21
CLIP2-203ENST00000395060 CHI3L1P36222 383 aaPredicted RBP13.72□□□□□ -0.21
CLIP2-203ENST00000395060 SCARB2Q14108 478 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 IFI44LQ53G44 452 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 ERICH5Q6P6B1 374 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 B3GLCTQ6Y288 498 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 NXPE1Q8N323 547 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 TCEANCQ8N8B7 351 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 ATP6V1C2Q8NEY4 427 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 GPATCH2Q9NW75 528 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 MAT2BQ9NZL9 334 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 POFUT2Q9Y2G5 429 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 A0A1B0GVC2 190 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 A0A1B0GVM2 712 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 A6NIN4 97 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 SLC38A8A6NNN8 435 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 NCR1O76036 304 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 VNN2O95498 520 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 CRYZL1O95825 349 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 PSMA1P25786 263 aaKnown RBP13.72□□□□□ -0.21
CLIP2-203ENST00000395060 CSNK1DP48730 415 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 RORCP51449 518 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms