RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 Q6ZS52 159 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 NRSN1Q8IZ57 195 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 USP7Q93009 1102 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 COQ10AQ96MF6 247 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 IL4I1Q96RQ9 567 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 APOOQ9BUR5 198 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 KAT8Q9H7Z6 458 aaKnown RBP15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 DMRT3Q9NQL9 472 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 DZANK1Q9NVP4 752 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 IFT80Q9P2H3 777 aaPredicted RBP15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 CD207Q9UJ71 328 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 DUSP12Q9UNI6 340 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 SLC6A12P48065 614 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 SIM1P81133 766 aaPredicted RBP15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 OR8J3Q8NGG0 315 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 UCN3Q969E3 161 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 UBE2FQ969M7 185 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 MRPL38Q96DV4 380 aaKnown RBP15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 CAMK1GQ96NX5 476 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 SLC7A5P2Q9GIP4 190 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 AGPAT4Q9NRZ5 378 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 TEX10Q9NXF1 929 aaPredicted RBP15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 GFRA2O00451 464 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 GNB5O14775 395 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 SLC16A5O15375 505 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 NDUFS2O75306 463 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 ALAS2P22557 587 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 PPP2R1BP30154 601 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 SLAMF1Q13291 335 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 GAB1Q13480 694 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 PIP5KL1Q5T9C9 394 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 TTC23Q5W5X9 447 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 OR2T5Q6IEZ7 315 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 EPHX4Q8IUS5 362 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 OR2T29Q8NH02 315 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 SGCDQ92629 289 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 VPS35Q96QK1 796 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 EHD1Q9H4M9 534 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 SPHK1Q9NYA1 384 aa15.21■□□□□ 0.03
SMARCD1-202ENST00000394963 SPEGQ15772 3267 aa15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 A8MU76 341 aa15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 J3KTA2 159 aa15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 OR12D1P0DN82 309 aa15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 SLC9A5Q14940 896 aa15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 ZNF385BQ569K4 471 aa15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 C16orf62Q7Z3J2 963 aa15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 C1QTNF3Q9BXJ4 246 aa15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 QRSL1Q9H0R6 528 aaKnown RBP15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 MARK1Q9P0L2 795 aa15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 TMED5Q9Y3A6 229 aa15.21■□□□□ 0.02
SMARCD1-202ENST00000394963 ADH1BP00325 375 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 GRIK2Q13002 908 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 CLCA4Q14CN2 919 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 NKG7Q16617 165 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 PDZD3Q86UT5 571 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 NUDT13Q86X67 352 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 TTC29Q8NA56 475 aaPredicted RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 ZNF548Q8NEK5 533 aaPredicted RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 MRPS26Q9BYN8 205 aaKnown RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 C11orf16Q9NQ32 467 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 THUMPD1Q9NXG2 353 aaKnown RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 BLOC1S6Q9UL45 172 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 CDC14AQ9UNH5 594 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 CCDC88CQ9P219 2028 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 LINC00854A0A1B0GVQ3 168 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 FAM227AF5H4B4 570 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 LCMT2O60294 686 aaKnown RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 ANGPTL1O95841 491 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 CDH3P22223 829 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 CLK1P49759 484 aaKnown RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 HOXC5Q00444 222 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 PPP4R4Q6NUP7 873 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 THAP5Q7Z6K1 395 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 NLGN4XQ8N0W4 816 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 ZFP28Q8NHY6 868 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 RAD21L1Q9H4I0 556 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 CXorf21Q9HAI6 301 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 NARSO43776 548 aaKnown RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 APOL3O95236 402 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 CERS1P27544 350 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 AVPR1BP47901 424 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 CCT3P49368 545 aaKnown RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 VLDLRP98155 873 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 TSPEARQ8WU66 669 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 SNRNP27Q8WVK2 155 aaKnown RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 RAB7BQ96AH8 199 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 BARD1Q99728 777 aaKnown RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 PAIP1Q9H074 479 aaKnown RBP15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 HRASLS2Q9NWW9 162 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 TAS2R9Q9NYW1 312 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 PCDHB11Q9Y5F2 797 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 COLEC10Q9Y6Z7 277 aa15.2■□□□□ 0.02
SMARCD1-202ENST00000394963 CCNDBP1O95273 360 aa15.19■□□□□ 0.02
SMARCD1-202ENST00000394963 CMPK1P30085 196 aa15.19■□□□□ 0.02
SMARCD1-202ENST00000394963 AGBL4Q5VU57 503 aa15.19■□□□□ 0.02
SMARCD1-202ENST00000394963 L3MBTL4Q8NA19 623 aa15.19■□□□□ 0.02
SMARCD1-202ENST00000394963 STARD8Q92502 1023 aa15.19■□□□□ 0.02
SMARCD1-202ENST00000394963 RERGQ96A58 199 aaPredicted RBP15.19■□□□□ 0.02
SMARCD1-202ENST00000394963 RGMAQ96B86 450 aa15.19■□□□□ 0.02
SMARCD1-202ENST00000394963 OR2M4Q96R27 311 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms