RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TSPAN19P0C672 248 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 HOXB9P17482 250 aaPredicted RBP18.13■□□□□ 0.49
HOXC6-202ENST00000394331 EVI2BP34910 448 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 TP53BP2Q13625 1128 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 ZNF273Q14593 569 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 NR6A1Q15406 480 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 RNF165Q6ZSG1 346 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 PHACTR4Q8IZ21 702 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 ZNF431Q8TF32 576 aaPredicted RBP18.13■□□□□ 0.49
HOXC6-202ENST00000394331 FBXW5Q969U6 566 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 KCNH6Q9H252 994 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 FOLH1BQ9HBA9 442 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 TMEM161AQ9NX61 479 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 ZNF226Q9NYT6 803 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 FAM50BQ9Y247 325 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 ARPC4-TTLL3A0A0A6YYG9 625 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 FAM25EA8MYX2 175 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 GFRA2O00451 464 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 E2F3O00716 465 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 ACSL4O60488 711 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 TSC22D2O75157 780 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 PIPP12273 146 aaPredicted RBP18.13■□□□□ 0.49
HOXC6-202ENST00000394331 HK1P19367 917 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 BTG1P62324 171 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 MED22Q15528 200 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 WSCD2Q2TBF2 565 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 GPR153Q6NV75 609 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 GLT6D1Q7Z4J2 308 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 RNF180Q86T96 592 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 OR4K2Q8NGD2 314 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 UPRTQ96BW1 309 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 ULK4Q96C45 1275 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 SPON2Q9BUD6 331 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 GPR62Q9BZJ7 368 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 HHATLQ9HCP6 504 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 HYKKA2RU49 373 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 ZNF682O95780 498 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 PRKAR2AP13861 404 aaKnown RBP18.12■□□□□ 0.49
HOXC6-202ENST00000394331 F8A1P23610 371 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 PSMA3P25788 255 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 CDH4P55283 916 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 VLDLRP98155 873 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 PRKCZQ05513 592 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 MBTPS1Q14703 1052 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 CARNMT1Q8N4J0 409 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 HERVK_113Q902F9 699 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 CREB3L1Q96BA8 519 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 AMBNQ9NP70 447 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 RAD18Q9NS91 495 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 TAS2R7Q9NYW3 318 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 INSIG1O15503 277 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 ESR1P03372 595 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 SLC11A2P49281 568 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 TPMTP51580 245 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 ERVPABLB-1P60509 514 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 CYP4F2P78329 520 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 ABATP80404 500 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 PYDC2Q56P42 97 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 DDI2Q5TDH0 399 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 SERPINA11Q86U17 422 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 TAGAPQ8N103 731 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 TMEM132CQ8N3T6 1108 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 ST8SIA4Q92187 359 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 DIRAS2Q96HU8 199 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 CRISPLD1Q9H336 500 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 NT5DC2Q9H857 520 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 EMC7Q9NPA0 242 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 SNTG1Q9NSN8 517 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 GALPQ9UBC7 116 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 UBQLN2Q9UHD9 624 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 GMEB2Q9UKD1 530 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 MED16Q9Y2X0 877 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 CRYBB2P43320 205 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 ACLYP53396 1101 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 TSNQ15631 228 aaKnown RBP18.12■□□□□ 0.49
HOXC6-202ENST00000394331 RFTN2Q52LD8 501 aaPredicted RBP18.12■□□□□ 0.49
HOXC6-202ENST00000394331 METAP1DQ6UB28 335 aaPredicted RBP18.12■□□□□ 0.49
HOXC6-202ENST00000394331 IL27RAQ6UWB1 636 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 C19orf18Q8NEA5 215 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 B3GNT7Q8NFL0 401 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 C2orf15Q8WU43 125 aaKnown RBP18.12■□□□□ 0.49
HOXC6-202ENST00000394331 DACT3Q96B18 629 aaPredicted RBP18.12■□□□□ 0.49
HOXC6-202ENST00000394331 EXOC2Q96KP1 924 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 B3GALT6Q96L58 329 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 SHARPINQ9H0F6 387 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 CCL27Q9Y4X3 112 aa18.12■□□□□ 0.49
HOXC6-202ENST00000394331 CFAP20Q9Y6A4 193 aaKnown RBP18.12■□□□□ 0.49
HOXC6-202ENST00000394331 FABP7O15540 132 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 KDELR3O43731 214 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 PRSS56P0CW18 603 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 PSMA1P25786 263 aaKnown RBP18.11■□□□□ 0.49
HOXC6-202ENST00000394331 ATP5C1P36542 298 aaKnown RBP18.11■□□□□ 0.49
HOXC6-202ENST00000394331 TFAP2EQ6VUC0 442 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 OR4F6Q8NGB9 312 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 NUDT8Q8WV74 236 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 CIDECQ96AQ7 238 aaPredicted RBP18.11■□□□□ 0.49
HOXC6-202ENST00000394331 DPY30Q9C005 99 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 SLC6A15Q9H2J7 730 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 IFT46Q9NQC8 304 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 FARSBQ9NSD9 589 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms