RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CA12O43570 354 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 HSD17B1P14061 328 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 NRIP1P48552 1158 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 SLC11A1P49279 550 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 ABCA11PQ4W5N1 156 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 TCEAL6Q6IPX3 200 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 DNM1P34Q6PK57 102 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 MON2Q7Z3U7 1717 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 KBTBD6Q86V97 674 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 CARM1Q86X55 608 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 OR51G2Q8NGK0 314 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 PEAK1Q9H792 1746 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 POLE4Q9NR33 117 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 TDP1Q9NUW8 608 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 SLC35F4A4IF30 521 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 A8MV72 311 aaPredicted RBP12.66□□□□□ -0.38
LCA5-202ENST00000392959 BEST1O76090 585 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 ZNF806P0C7X5 589 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 CD47Q08722 323 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 NPRL3Q12980 569 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 SEC23BQ15437 767 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 COQ5Q5HYK3 327 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 SLC27A4Q6P1M0 643 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 PMM1Q92871 262 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 BEX2Q9BXY8 128 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 BEX1Q9HBH7 125 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 FAM118AQ9NWS6 357 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 EXTL2Q9UBQ6 330 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 ZNF451Q9Y4E5 1061 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 PIK3C2AO00443 1686 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 VILLO15195 856 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 PENKP01210 267 aaPredicted RBP12.66□□□□□ -0.38
LCA5-202ENST00000392959 ADH5P11766 374 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 CKMT1AP12532 417 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 GADD45AP24522 165 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 SLC6A6P31641 620 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 RING1Q06587 406 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 TMEM115Q12893 351 aaPredicted RBP12.66□□□□□ -0.38
LCA5-202ENST00000392959 CYP27C1Q4G0S4 372 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 CCSAPQ6IQ19 270 aaPredicted RBP12.66□□□□□ -0.38
LCA5-202ENST00000392959 LCN8Q6JVE9 175 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 NCCRP1Q6ZVX7 275 aaPredicted RBP12.66□□□□□ -0.38
LCA5-202ENST00000392959 CHERPQ8IWX8 916 aaKnown RBP12.66□□□□□ -0.38
LCA5-202ENST00000392959 PHC2Q8IXK0 858 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 C7orf57Q8NEG2 295 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 OR8J1Q8NGP2 316 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 NPLOC4Q8TAT6 608 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 CREB3L1Q96BA8 519 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 DGAT2Q96PD7 388 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 SCGB3A2Q96PL1 93 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 DNAJC5Q9H3Z4 198 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 ZNF304Q9HCX3 659 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 GNG8Q9UK08 70 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 CDC14AQ9UNH5 594 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 PCDHB11Q9Y5F2 797 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 SOCS2O14508 198 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 MAFKO60675 156 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 UQCRC2P22695 453 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 GKP32189 559 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 SCAPQ12770 1279 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 LIPKQ5VXJ0 399 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 ZSWIM9Q86XI8 627 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 ASCC1Q8N9N2 400 aaKnown RBP12.65□□□□□ -0.38
LCA5-202ENST00000392959 NEIL3Q8TAT5 605 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 SHKBP1Q8TBC3 707 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 JSRP1Q96MG2 331 aaPredicted RBP12.65□□□□□ -0.38
LCA5-202ENST00000392959 RANBP9Q96S59 729 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 CERS4Q9HA82 394 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 MTMR10Q9NXD2 777 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 KCNK6Q9Y257 313 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 DLG5Q8TDM6 1919 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 PCDHGA12O60330 932 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 IFNA21P01568 189 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 MEF2AQ02078 507 aaPredicted RBP12.65□□□□□ -0.38
LCA5-202ENST00000392959 GHRHRQ02643 423 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 FAM189A2Q15884 450 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 ZNF181Q2M3W8 571 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 SAMD12Q8N8I0 201 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 THEM6Q8WUY1 208 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 SMPDL3BQ92485 455 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 EBF1Q9UH73 591 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
LCA5-202ENST00000392959 PRRC2BQ5JSZ5 2229 aaKnown RBP12.65□□□□□ -0.38
LCA5-202ENST00000392959 TRAV6A0A075B6T7 132 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 EDDM13A0A1B0GTR0 161 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 NFKBIEO00221 500 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 KMOO15229 486 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 PDYNP01213 254 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 TYRP14679 529 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 MAPK3P27361 379 aaPredicted RBP12.65□□□□□ -0.38
LCA5-202ENST00000392959 LCN1P31025 176 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 NRG3P56975 720 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 TSC22D1Q15714 1073 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 SETD6Q8TBK2 473 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 SCAMP4Q969E2 229 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 DPYSL5Q9BPU6 564 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 C17orf62Q9BQA9 187 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 C11orf84Q9BUA3 381 aaPredicted RBP12.65□□□□□ -0.38
LCA5-202ENST00000392959 FUNDC2Q9BWH2 189 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms