RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 MAPRE3Q9UPY8 281 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 PCYT1BQ9Y5K3 369 aaPredicted RBP18.24■□□□□ 0.51
CCDC50-202ENST00000392456 SSX4O60224 188 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 SNAP29O95721 258 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 GUCA1CO95843 209 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 DGKAP23743 735 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 GTF2E2P29084 291 aaKnown RBP18.24■□□□□ 0.51
CCDC50-202ENST00000392456 GPR1P46091 355 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 FGL2Q14314 439 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 SMAD2Q15796 467 aaKnown RBP18.24■□□□□ 0.51
CCDC50-202ENST00000392456 ZNF776Q68DI1 518 aaPredicted RBP18.24■□□□□ 0.51
CCDC50-202ENST00000392456 TMEM92Q6UXU6 159 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 RPLP0P6Q8NHW5 317 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 HLA-CQ95604 372 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 RAB7BQ96AH8 199 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 SGK3Q96BR1 496 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 DGCR6LQ9BY27 220 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 MRPL40Q9NQ50 206 aaKnown RBP18.24■□□□□ 0.51
CCDC50-202ENST00000392456 RAD18Q9NS91 495 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 ZFR2Q9UPR6 939 aaKnown RBP18.24■□□□□ 0.51
CCDC50-202ENST00000392456 CDYLQ9Y232 598 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 NPC1O15118 1278 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 CAPN5O15484 640 aaPredicted RBP18.23■□□□□ 0.51
CCDC50-202ENST00000392456 TSPAN6O43657 245 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 ADH1BP00325 375 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 APOA1P02647 267 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 KELP23276 732 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 SH3BP2P78314 561 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 PRKAA1Q13131 559 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 GPR50Q13585 617 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 MBOAT1Q6ZNC8 495 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 PRSS48Q7RTY5 328 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 SPRED1Q7Z699 444 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 CUZD1Q86UP6 607 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 LIX1LQ8IVB5 337 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 GANCQ8TET4 914 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 DEDD2Q8WXF8 326 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 FOXJ1Q92949 421 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 MSANTD3Q96H12 275 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 C9orf16Q9BUW7 83 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 TMEM168Q9H0V1 697 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 C8orf33Q9H7E9 229 aaPredicted RBP18.23■□□□□ 0.51
CCDC50-202ENST00000392456 ANKHQ9HCJ1 492 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 ZBTB26Q9HCK0 441 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 MBNL1Q9NR56 388 aaKnown RBP18.23■□□□□ 0.51
CCDC50-202ENST00000392456 CD274Q9NZQ7 290 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 GULP1Q9UBP9 304 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 RNF103-CHMP3A0A140T963 221 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 KLK8O60259 260 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 KATNA1O75449 491 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 ACADMP11310 421 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 DRD1P21728 446 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 GP2P55259 537 aaKnown RBP18.23■□□□□ 0.51
CCDC50-202ENST00000392456 WSCD2Q2TBF2 565 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 TMEM31Q5JXX7 168 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 FAM110BQ8TC76 370 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 LGR4Q9BXB1 951 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 OR2AG1Q9H205 316 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 TOR3AQ9H497 397 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 TAS2R9Q9NYW1 312 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 ADA2Q9NZK5 511 aa18.23■□□□□ 0.51
CCDC50-202ENST00000392456 A0A0C4DFX4 3053 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 SLC22A2O15244 555 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 ARHGEF9O43307 516 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 RASAL1O95294 804 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 PAK4O96013 591 aaPredicted RBP18.22■□□□□ 0.51
CCDC50-202ENST00000392456 IL9P15248 144 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 PRDX3P30048 256 aaKnown RBP18.22■□□□□ 0.51
CCDC50-202ENST00000392456 RGS4P49798 205 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 ADARB1P78563 741 aaKnown RBP18.22■□□□□ 0.51
CCDC50-202ENST00000392456 DPTQ07507 201 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 CCINQ13939 588 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 STARD3Q14849 445 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 COLEC12Q5KU26 742 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 CLEC6AQ6EIG7 209 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 TMEM220Q6QAJ8 160 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 CREB3L2Q70SY1 520 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 HDDC2Q7Z4H3 204 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 FAM124AQ86V42 546 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 CCDC36Q8IYA8 594 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 ELMO1Q92556 727 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 DNASE1L2Q92874 299 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 FYTTD1Q96QD9 318 aaKnown RBP18.22■□□□□ 0.51
CCDC50-202ENST00000392456 PHOX2BQ99453 314 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 RANGRFQ9HD47 186 aaPredicted RBP18.22■□□□□ 0.51
CCDC50-202ENST00000392456 IFT46Q9NQC8 304 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 MKL2Q9ULH7 1088 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 NDRG2Q9UN36 371 aaKnown RBP18.22■□□□□ 0.51
CCDC50-202ENST00000392456 A0A1W2PRG6 482 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 ERP29P30040 261 aaKnown RBP18.22■□□□□ 0.51
CCDC50-202ENST00000392456 FOXA1P55317 472 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 GBX1Q14549 363 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 TMEM81Q6P7N7 255 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 OR14C36Q8NHC7 312 aa18.22■□□□□ 0.51
CCDC50-202ENST00000392456 SEMA4BQ9NPR2 832 aaPredicted RBP18.22■□□□□ 0.51
CCDC50-202ENST00000392456 PAK1IP1Q9NWT1 392 aaPredicted RBP18.22■□□□□ 0.51
CCDC50-202ENST00000392456 SMPD3Q9NY59 655 aaPredicted RBP18.22■□□□□ 0.51
CCDC50-202ENST00000392456 PCCBP05166 539 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 FOSL2P15408 326 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 PRKAR1BP31321 381 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms