RNA–Protein interactions for RNA: ENST00000384310.1

RNU6-339P-201, Transcript of RNA, U6 small nuclear 339, pseudogene, humanhuman

BASIC

Gene RNU6-339P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-339P-201ENST00000384310 YRDCQ86U90 279 aaKnown RBP3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 RCOR2Q8IZ40 523 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 RBMXL3Q8N7X1 1067 aaKnown RBP3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 SMRP1Q8NCR6 262 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 GPRC5AQ8NFJ5 357 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 STEAP2Q8NFT2 490 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 TRIM58Q8NG06 486 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 OR56B2PQ8NGI1 322 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 OR13C3Q8NGS6 347 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 MRPL53Q96EL3 112 aaKnown RBP3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 ZBTB18Q99592 522 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 CCT7Q99832 543 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 EDEM2Q9BV94 578 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 SF3B5Q9BWJ5 86 aaKnown RBP3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 GCOM2Q9BZD3 368 aaPredicted RBP3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 LAT2Q9GZY6 243 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 PELI2Q9HAT8 420 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 UPF2Q9HAU5 1272 aaKnown RBP3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 HIF1ANQ9NWT6 349 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 RDH8Q9NYR8 311 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 OR6C2Q9NZP2 312 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 C11orf21Q9P2W6 132 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 WNT16Q9UBV4 365 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 C19orf25Q9UFG5 118 aaPredicted RBP3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 IL36AQ9UHA7 158 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 BCAP29Q9UHQ4 241 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 PTBP2Q9UKA9 531 aaKnown RBP3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 PCDHA7Q9UN72 937 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 ATG4BQ9Y4P1 393 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 SPACA6W5XKT8 324 aa3.53□□□□□ -1.84
RNU6-339P-201ENST00000384310 SF3B1O75533 1304 aaKnown RBP eCLIP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 IGLV5-37A0A075B6J1 123 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 LOC101059948A0A1B0GTJ6 334 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 A0A1W2PN81 502 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 FPGTO14772 594 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 PPEF2O14830 753 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 KIF5CO60282 957 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 PRKRAO75569 313 aaKnown RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 KIAA0754O94854 1291 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 PMS2P2O95744 297 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 EPOP01588 193 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 ATP1B1P05026 303 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 IQCF3P0C7M6 154 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 HLA-DOBP13765 273 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 TMOD1P28289 359 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 PTPN4P29074 926 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 RBMS1P29558 406 aaKnown RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 PPP2R1AP30153 589 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 CHRNA7P36544 502 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 SLC1A6P48664 564 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 NR2C2P49116 596 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 MAZP56270 477 aaKnown RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 B3GALT5-AS1P59052 145 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 CCNA1P78396 465 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 NUCB2P80303 420 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 FUT7Q11130 342 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 CEACAM7Q14002 265 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 TMEM132DQ14C87 1099 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 HERC3Q15034 1050 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 IMMTQ16891 758 aaKnown RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 KCTD21Q4G0X4 260 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 STXBP5Q5T5C0 1151 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 LYPLAL1Q5VWZ2 237 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 SNRNP48Q6IEG0 339 aaKnown RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 SLC27A4Q6P1M0 643 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 CRIP3Q6Q6R5 217 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 CEACAM20Q6UY09 585 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 TMEM64Q6YI46 380 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 LUZP1Q86V48 1076 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 SFR1Q86XK3 245 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 GRAMD2AQ8IUY3 354 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 GCNT2Q8N0V5 402 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 MUC20Q8N307 709 aaPredicted RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 SLC43A2Q8N370 569 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 GBP7Q8N8V2 638 aaPredicted RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 EIF1ADQ8N9N8 165 aaKnown RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 COLGALT1Q8NBJ5 622 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 CCDC197Q8NCU1 140 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 OR2T12Q8NG77 320 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 ZNF473Q8WTR7 871 aaKnown RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 CHPT1Q8WUD6 406 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 TMED6Q8WW62 240 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 HSD17B8Q92506 261 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 PIK3R3Q92569 461 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 MCHR2Q969V1 340 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 NCLNQ969V3 563 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 BPIFA2Q96DR5 249 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 C4orf45Q96LM5 186 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 ZNF48Q96MX3 618 aaPredicted RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 S1PR3Q99500 378 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 CBWD1Q9BRT8 395 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 NUSAP1Q9BXS6 441 aaKnown RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 CAPS2Q9BXY5 557 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 VCX2Q9H322 139 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 UBTD1Q9HAC8 227 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 SDR39U1Q9NRG7 319 aaPredicted RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 RBM28Q9NW13 759 aaKnown RBP3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 OCIAD1Q9NX40 245 aa3.52□□□□□ -1.85
RNU6-339P-201ENST00000384310 PLEK2Q9NYT0 353 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms