RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 MAT1AQ00266 395 aaKnown RBP12□□□□□ -0.49
SMN1-202ENST00000380707 TBL3Q12788 808 aaKnown RBP12□□□□□ -0.49
SMN1-202ENST00000380707 DSG2Q14126 1118 aa12□□□□□ -0.49
SMN1-202ENST00000380707 MAP7Q14244 749 aa12□□□□□ -0.49
SMN1-202ENST00000380707 SYT16Q17RD7 645 aa12□□□□□ -0.49
SMN1-202ENST00000380707 OR4C11Q6IEV9 310 aa12□□□□□ -0.49
SMN1-202ENST00000380707 RGS9BPQ6ZS82 235 aa12□□□□□ -0.49
SMN1-202ENST00000380707 RNF165Q6ZSG1 346 aa12□□□□□ -0.49
SMN1-202ENST00000380707 Q6ZSR9 355 aa12□□□□□ -0.49
SMN1-202ENST00000380707 COX15Q7KZN9 410 aa12□□□□□ -0.49
SMN1-202ENST00000380707 DDIASQ8IXT1 998 aa12□□□□□ -0.49
SMN1-202ENST00000380707 CACNA2D3Q8IZS8 1091 aa12□□□□□ -0.49
SMN1-202ENST00000380707 ESX1Q8N693 406 aa12□□□□□ -0.49
SMN1-202ENST00000380707 SRFBP1Q8NEF9 429 aaKnown RBP12□□□□□ -0.49
SMN1-202ENST00000380707 OR5T3Q8NGG3 340 aa12□□□□□ -0.49
SMN1-202ENST00000380707 OR2T11Q8NH01 316 aa12□□□□□ -0.49
SMN1-202ENST00000380707 NKD1Q969G9 470 aa12□□□□□ -0.49
SMN1-202ENST00000380707 COL26A1Q96A83 441 aa12□□□□□ -0.49
SMN1-202ENST00000380707 C3orf30Q96M34 536 aa12□□□□□ -0.49
SMN1-202ENST00000380707 DPH2Q9BQC3 489 aaPredicted RBP12□□□□□ -0.49
SMN1-202ENST00000380707 CENPKQ9BS16 269 aa12□□□□□ -0.49
SMN1-202ENST00000380707 TBCDQ9BTW9 1192 aa12□□□□□ -0.49
SMN1-202ENST00000380707 CCDC86Q9H6F5 360 aaKnown RBP12□□□□□ -0.49
SMN1-202ENST00000380707 FAM53CQ9NYF3 392 aa12□□□□□ -0.49
SMN1-202ENST00000380707 DKK4Q9UBT3 224 aa12□□□□□ -0.49
SMN1-202ENST00000380707 MARCOQ9UEW3 520 aaPredicted RBP12□□□□□ -0.49
SMN1-202ENST00000380707 CDC14AQ9UNH5 594 aa12□□□□□ -0.49
SMN1-202ENST00000380707 CCL27Q9Y4X3 112 aa12□□□□□ -0.49
SMN1-202ENST00000380707 C1QTNF9BB2RNN3 333 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 H0YIG0 161 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 EEDO75530 441 aaKnown RBP11.99□□□□□ -0.49
SMN1-202ENST00000380707 SEMA3DO95025 777 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 ONECUT2O95948 504 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 C1QTNF9P0C862 333 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 KITP10721 976 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 LIPCP11150 499 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 AGXTP21549 392 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 FBLP22087 321 aaKnown RBP11.99□□□□□ -0.49
SMN1-202ENST00000380707 HIST1H1TP22492 207 aaPredicted RBP11.99□□□□□ -0.49
SMN1-202ENST00000380707 ATP5A1P25705 553 aaKnown RBP11.99□□□□□ -0.49
SMN1-202ENST00000380707 CERS1P27544 350 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 MDH1P40925 334 aaKnown RBP11.99□□□□□ -0.49
SMN1-202ENST00000380707 STAT5AP42229 794 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 PCBP4P57723 403 aaKnown RBP11.99□□□□□ -0.49
SMN1-202ENST00000380707 OLR1P78380 273 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 TGM3Q08188 693 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 PDCD2Q16342 344 aaPredicted RBP11.99□□□□□ -0.49
SMN1-202ENST00000380707 AP5B1Q2VPB7 878 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 ARHGAP40Q5TG30 622 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 FAM47EQ6ZV65 393 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 METTL4Q8N3J2 472 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 ACOT4Q8N9L9 421 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 APIPQ96GX9 242 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 C7orf26Q96N11 449 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 NMRK1Q9NWW6 199 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 HCN3Q9P1Z3 774 aa11.99□□□□□ -0.49
SMN1-202ENST00000380707 IFT80Q9P2H3 777 aaPredicted RBP11.99□□□□□ -0.49
SMN1-202ENST00000380707 LOC101059948A0A1B0GTJ6 334 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 TCP11X1B4DZS4 312 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 GBAP04062 536 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 TCN2P20062 427 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 SSR2P43308 183 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 ARFIP1P53367 373 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 GYS2P54840 703 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 MTTPP55157 894 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 SKP1P63208 163 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 BTKQ06187 659 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 RUNX2Q13950 521 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 IMPG1Q17R60 797 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 XKR7Q5GH72 579 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 SPDYAQ5MJ70 313 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 MLIPQ5VWP3 458 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 NIPAL1Q6NVV3 410 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 FAM198BQ6UWH4 519 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 COMMD6Q7Z4G1 85 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 CRLF3Q8IUI8 442 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 PIWIL2Q8TC59 973 aaKnown RBP11.98□□□□□ -0.49
SMN1-202ENST00000380707 CT55Q8WUE5 264 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 CHTF18Q8WVB6 975 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 C19orf60Q96EN9 201 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 NAF1Q96HR8 494 aaKnown RBP11.98□□□□□ -0.49
SMN1-202ENST00000380707 PPP1R36Q96LQ0 422 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 DDX31Q9H8H2 851 aaKnown RBP11.98□□□□□ -0.49
SMN1-202ENST00000380707 AHSPQ9NZD4 102 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 TRPC4Q9UBN4 977 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 CTSFQ9UBX1 484 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 CROTQ9UKG9 612 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 MAP4K5Q9Y4K4 846 aa11.98□□□□□ -0.49
SMN1-202ENST00000380707 MGAQ8IWI9 3026 aa11.97□□□□□ -0.49
SMN1-202ENST00000380707 A0A088AWK7 358 aa11.97□□□□□ -0.49
SMN1-202ENST00000380707 ATP6AP2A0A1C7CYW4 349 aa11.97□□□□□ -0.49
SMN1-202ENST00000380707 SLC28A1O00337 649 aa11.97□□□□□ -0.49
SMN1-202ENST00000380707 TERTO14746 1132 aaKnown RBP11.97□□□□□ -0.49
SMN1-202ENST00000380707 LSM1O15116 133 aaKnown RBP11.97□□□□□ -0.49
SMN1-202ENST00000380707 CHST10O43529 356 aa11.97□□□□□ -0.49
SMN1-202ENST00000380707 RGS14O43566 566 aa11.97□□□□□ -0.49
SMN1-202ENST00000380707 B3GALT2O43825 422 aa11.97□□□□□ -0.49
SMN1-202ENST00000380707 CNOT3O75175 753 aaKnown RBP11.97□□□□□ -0.49
SMN1-202ENST00000380707 ATP6AP2O75787 350 aa11.97□□□□□ -0.49
SMN1-202ENST00000380707 RSL1D1O76021 490 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms