RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 HCN2Q9UL51 889 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ERVW-1Q9UQF0 538 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 SAMHD1Q9Y3Z3 626 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 MAFBQ9Y5Q3 323 aaPredicted RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 CACNA1SQ13698 1873 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TRBV23OR9-2A0A075B6M9 112 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TMEM200CA6NKL6 621 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 M0R129 80 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 QSOX1O00391 747 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 CXCR6O00574 342 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TREHO43280 583 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 SEC14L5O43304 696 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ULK1O75385 1050 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 MBP02144 154 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF8P17098 575 aaPredicted RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 PTBP1P26599 531 aaKnown RBP eCLIP8.2□□□□□ -1.16e-7■□□□□ 10.6
NHLRC3-201ENST00000379599 ACTR1BP42025 376 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ASPAP45381 313 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 CTSCP53634 463 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 C21orf58P58505 322 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TAS2R39P59534 338 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 RAB5BP61020 215 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 COTL1Q14019 142 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 IRF4Q15306 451 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 CPZQ66K79 652 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 PDE12Q6L8Q7 609 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 EFCAB12Q6NXP0 572 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 SHQ1Q6PI26 577 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 WASH2PQ6VEQ5 465 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 SMIM5Q71RC9 77 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF367Q7RTV3 350 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 RYBPQ8N488 228 aaPredicted RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 OR9Q1Q8NGQ5 310 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 CREB3L4Q8TEY5 395 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TMEM203Q969S6 136 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 MS4A3Q96HJ5 214 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TOX2Q96NM4 488 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 CSPG4P5Q96PW8 444 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 BBS4Q96RK4 519 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ADAT1Q9BUB4 502 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 WDR18Q9BV38 432 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 B3GAT2Q9NPZ5 323 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 EXO1Q9UQ84 846 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 PRKAB1Q9Y478 270 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 COL22A1Q8NFW1 1626 aaPredicted RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 OR6C68A6NDL8 312 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 ITGBL1O95965 494 aaPredicted RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 GPD1P21695 349 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 VAMP1P23763 118 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 FOXA1P55317 472 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 WNT7BP56706 349 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 SNRPFP62306 86 aaKnown RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 RCAN2Q14206 197 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 SSX1Q16384 188 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 RNF212Q495C1 297 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 CCDC157Q569K6 752 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 HECTD3Q5T447 861 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 OR6B2Q6IFH4 312 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 DLEU7Q6UYE1 221 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 SERINC5Q86VE9 423 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 ATCAYQ86WG3 371 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 DENND6AQ8IWF6 608 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 CARFQ8N187 725 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 ATPAF2Q8N5M1 289 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 FAM181AQ8N9Y4 354 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 L3MBTL4Q8NA19 623 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 DNAJB8Q8NHS0 232 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 ADAMTS19Q8TE59 1207 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 SETD7Q8WTS6 366 aaKnown RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 GATAD2BQ8WXI9 593 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 C11orf24Q96F05 449 aaPredicted RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 DDOQ99489 341 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 CPEB1Q9BZB8 566 aaKnown RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 METTL17Q9H7H0 456 aaPredicted RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 NT5DC2Q9H857 520 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 POLG2Q9UHN1 485 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 SCP2D1Q9UJQ7 156 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 CLEC4AQ9UMR7 237 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 PTCH2Q9Y6C5 1203 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 NUP188Q5SRE5 1749 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 PTPRJQ12913 1337 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 UBR2Q8IWV8 1755 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 IQCMA0A1B0GVH7 501 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 KCNK1O00180 336 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 AZIN1O14977 448 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 PSMD10O75832 226 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 ENDOD1O94919 500 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 C4BPAP04003 597 aaKnown RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 H2AFB1P0C5Y9 115 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 H2AFB2P0C5Z0 115 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 MAPTP10636 758 aaKnown RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 IL2RBP14784 551 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 ATP5A1P25705 553 aaKnown RBP8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 NMBRP28336 390 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 VIPR1P32241 457 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 CAV3P56539 151 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 ACTR1AP61163 376 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 BTG1P62324 171 aa8.19□□□□□ -1.1
NHLRC3-201ENST00000379599 SH3BP2P78314 561 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms