RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 TACR2P21452 398 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ACSM1Q08AH1 577 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ASB12Q8WXK4 309 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TRIM43BA6NCK2 446 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PAHP00439 452 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 KCNJ5P48544 419 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PLA2G16P53816 162 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 UBE2MP61081 183 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 RAB33AQ14088 237 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 RAB39AQ14964 217 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 MPPED2Q15777 294 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 FAM131AQ6UXB0 335 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 JOSD2Q8TAC2 188 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 DCUN1D5Q9BTE7 237 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SPIN1Q9Y657 262 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 OR51F1A6NGY5 319 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 MTRF1O75570 445 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CLEC3AO75596 197 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 OR2T7P0C7T2 308 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 NUDT6P53370 316 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 AGAP6Q5VW22 663 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 IFNL1Q8IU54 200 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SYNPOQ8N3V7 929 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 OR2T27Q8NH04 317 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF417Q8TAU3 575 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 AGAP4Q96P64 663 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 GSX2Q9BZM3 304 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 COMMD4Q9H0A8 199 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 NDRG4Q9ULP0 352 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 IGF2P01344 180 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CYC1P08574 325 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CPA2P48052 419 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PROKR1Q8TCW9 393 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CIB4A0PJX0 185 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SRPXP78539 464 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CRTC2Q53ET0 693 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PET117Q6UWS5 81 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TCEAL8Q8IYN2 117 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 HORMAD2Q8N7B1 307 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SMURF1Q9HCE7 757 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SERINC1Q9NRX5 453 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PCTPQ9UKL6 214 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 GABARAPO95166 117 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 MC4RP32245 332 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 DCTP40126 519 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TRMT10BQ6PF06 316 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 FUNDC1Q8IVP5 155 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CCDC24Q8N4L8 307 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF675Q8TD23 568 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PKP2Q99959 881 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TP53P04637 393 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 FYNP06241 537 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CD1DP15813 335 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ENGP17813 658 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 VRK3Q8IV63 474 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 KLHL32Q96NJ5 620 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PSORS1C1Q9UIG5 152 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 NME6O75414 186 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TPH1P17752 444 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ITGB7P26010 798 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SLC6A6P31641 620 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 MS4A13Q5J8X5 152 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SHFQ7M4L6 423 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SLC39A13Q96H72 371 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TMEM98Q9Y2Y6 226 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CYB5R2Q6BCY4 276 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TICAM1Q8IUC6 712 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 Q8N402 240 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PHOSPHO2Q8TCD6 241 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ACOT7O00154 380 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 GNB5O14775 395 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 APEHP13798 732 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SERTAD2Q14140 314 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PXDC1Q5TGL8 231 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SSNA1O43805 119 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CMPK1P30085 196 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TAS2R31P59538 309 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ELAVL3Q14576 367 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ISXQ2M1V0 245 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TMEM64Q6YI46 380 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TRILQ7L0X0 811 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TEPSINQ96N21 525 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ADAM8P78325 824 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 LAYNQ6UX15 382 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 FUNDC2Q9BWH2 189 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 NMBRP28336 390 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 MIB1Q86YT6 1006 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PBDC1Q9BVG4 233 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 GGT2P36268 569 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 GSK3AP49840 483 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 MAP1SQ66K74 1059 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 BCL2L10Q9HD36 194 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 MOCS2O96007 188 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 KLRK1P26718 216 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF704Q6ZNC4 412 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 DSN1Q9H410 356 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 YJEFN3A6XGL0 299 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 DOK6Q6PKX4 331 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ADGRG5Q8IZF4 528 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms