RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	RPS7	P62081	194 aa	Known RBP	12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	SP140	Q13342	867 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	NDUFAF5	Q5TEU4	345 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	TMEM184A	Q6ZMB5	413 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	CCDC81	Q6ZN84	652 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	VN1R5	Q7Z5H4	357 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	COX18	Q8N8Q8	333 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	CCDC74A	Q96AQ1	378 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	OR6C1	Q96RD1	312 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	CIB1	Q99828	191 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	RIBC2	Q9H4K1	309 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	ZNF556	Q9HAH1	456 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	NAALAD2	Q9Y3Q0	740 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	HCN4	Q9Y3Q4	1203 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	TESMIN	Q9Y4I5	508 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	NPIPA5	A0A0B4J1W7	369 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	SPTY2D1-AS1	A0A0U1RR47	76 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	NPIPA7	E9PJI5	369 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	NPIPA8	P0DM63	369 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	CD1E	P15812	388 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	MPL	P40238	635 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	KCNAB2	Q13303	367 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	GAB4	Q2WGN9	574 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	OR5M10	Q6IEU7	315 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	TMEM214	Q6NUQ4	689 aa	Known RBP	12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	IZUMO2	Q6UXV1	221 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	ABHD13	Q7L211	337 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	KLHL31	Q9H511	634 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	FGF21	Q9NSA1	209 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	TRNAU1AP	Q9NX07	287 aa	Known RBP	12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	PTBP2	Q9UKA9	531 aa	Known RBP	12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	USP22	Q9UPT9	525 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	SLC5A10	A0PJK1	596 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	EED	O75530	441 aa	Known RBP	12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	ZBTB11	O95625	1053 aa	Predicted RBP	12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	EFEMP2	O95967	443 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	OPN1LW	P04000	364 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	CCND1	P24385	295 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	ASMT	P46597	345 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	BNIP1	Q12981	228 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	CES4A	Q5XG92	561 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	ALG1L	Q6GMV1	187 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	CEACAM20	Q6UY09	585 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	OR2T11	Q8NH01	316 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	WDR60	Q8WVS4	1066 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	KLHL28	Q9NXS3	571 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	RIMKLB	Q9ULI2	386 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	FH	P07954	510 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	FAM58BP	P0C7Q3	252 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	PFN3	P60673	137 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	ELF3	P78545	371 aa	Predicted RBP	12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	ZNF763	Q0D2J5	394 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	EPS8	Q12929	822 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	FZD2	Q14332	565 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	FAM98B	Q52LJ0	330 aa	Known RBP	12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	FAM69B	Q5VUD6	431 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	KIAA1614	Q5VZ46	1190 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	C18orf63	Q68DL7	685 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	GUSBP11	Q6P575	273 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	MFSD2A	Q8NA29	543 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	TP53I13	Q8NBR0	393 aa	Predicted RBP	12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	ZNF548	Q8NEK5	533 aa	Predicted RBP	12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	MIEF2	Q96C03	454 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	PLEKHA8	Q96JA3	519 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	ARMC7	Q9H6L4	198 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	RARRES3	Q9UL19	164 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	TMCC3	Q9ULS5	477 aa		12.93	□□□□□ -0.34
DDR1-225	ENST00000376568	NR2F6	P10588	404 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	IL7R	P16871	459 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	XCR1	P46094	333 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	YPEL5	P62699	121 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	BNC1	Q01954	994 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	TRAF3	Q13114	568 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	CDC73	Q6P1J9	531 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	LRRC58	Q96CX6	371 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	RPF2	Q9H7B2	306 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	TPT1P8	Q9HAU6	139 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	ZNF624	Q9P2J8	865 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	GTF2A1L	Q9UNN4	478 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	CHD8	Q9HCK8	2581 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	ANHX	E9PGG2	379 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568		M0QX08	132 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	SIGLEC6	O43699	453 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	RPS17	P08708	135 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	SBK3	P0C264	359 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	PRPS2	P11908	318 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	PRPS1L1	P21108	318 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	MPI	P34949	423 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	CCT3	P49368	545 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	PAGE3	Q5JUK9	113 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	CLEC14A	Q86T13	490 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	OR2L3	Q8NG85	312 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	RMND5B	Q96G75	393 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	CCDC28B	Q9BUN5	200 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	EDEM2	Q9BV94	578 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	ANKRD10	Q9NXR5	420 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	MKLN1	Q9UL63	735 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	MED16	Q9Y2X0	877 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	LYVE1	Q9Y5Y7	322 aa		12.92	□□□□□ -0.34
DDR1-225	ENST00000376568	ZNF318	Q5VUA4	2279 aa		12.92	□□□□□ -0.34

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