RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 A0A0A6YYJ9 748 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 MEIS3P2A8K0S8 358 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 CLIC1O00299 241 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 AKAP8O43823 692 aaKnown RBP19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 HOXC13P31276 330 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 BMP8BP34820 402 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 PCBP2Q15366 365 aaKnown RBP eCLIP19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 KLHL22Q53GT1 634 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 MANEALQ5VSG8 457 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 USP50Q70EL3 339 aaPredicted RBP19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 BMP8AQ7Z5Y6 402 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 CEP76Q8TAP6 659 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 ST8SIA2Q92186 375 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 TMEM203Q969S6 136 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 MS4A4AQ96JQ5 239 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 CPNE7Q9UBL6 633 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 PPT2Q9UMR5 302 aa19.77■□□□□ 0.76
TMEFF1-201ENST00000374879 ISM1B1AKI9 464 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 SLC28A1O00337 649 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 LRATO95237 230 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 IL1AP01583 271 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 TNFRSF1BP20333 461 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 HSPA7P48741 367 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 CRYBA2P53672 197 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 RPS14P62263 151 aaKnown RBP19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 ZNF273Q14593 569 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 SPDYE7PQ495Y7 208 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 ERICH5Q6P6B1 374 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 TRILQ7L0X0 811 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 CLDN22Q8N7P3 220 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 OR9Q1Q8NGQ5 310 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 ARRDC2Q8TBH0 407 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 TSSK3Q96PN8 268 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 SLC28A3Q9HAS3 691 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 CUEDC1Q9NWM3 386 aaPredicted RBP19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 NDUFB11Q9NX14 153 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 COMMD3Q9UBI1 195 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 UBQLN2Q9UHD9 624 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 CPA4Q9UI42 421 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 ZNF222Q9UK12 451 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 FZD6O60353 706 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 TPST2O60704 377 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 DPM1O60762 260 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 IFNA7P01567 189 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 HBQ1P09105 142 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 HAPLN1P10915 354 aaPredicted RBP19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 ATF6P18850 670 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 AQP1P29972 269 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 SDC2P34741 201 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 CLCN4P51793 760 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 CAV3P56539 151 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 FOXD4Q12950 439 aaPredicted RBP19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 PTGES3Q15185 160 aaKnown RBP19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 MSANTD2Q6P1R3 559 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 PTCHD4Q6ZW05 846 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 PDZD3Q86UT5 571 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 TRIM69Q86WT6 500 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 OR9Q2Q8NGE9 314 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 CD200R1Q8TD46 325 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 RBP7Q96R05 134 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 POLR2J2Q9GZM3 115 aaKnown RBP19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 RANBP3Q9H6Z4 567 aaPredicted RBP19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 ANKRA2Q9H9E1 313 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 IFT46Q9NQC8 304 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 PCDHGB7Q9Y5F8 929 aa19.76■□□□□ 0.75
TMEFF1-201ENST00000374879 ULK1O75385 1050 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 PSIP1O75475 530 aaKnown RBP19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 CFDP00746 253 aaPredicted RBP19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 TUSC1Q2TAM9 212 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 CNIH2Q6PI25 160 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 PLEKHH3Q7Z736 793 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 DNAJC5GQ8N7S2 189 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 RTL3Q8N8U3 475 aaKnown RBP19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 CHTF18Q8WVB6 975 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 HMCESQ96FZ2 354 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 ZSWIM3Q96MP5 696 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 CLN6Q9NWW5 311 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 MRPL39Q9NYK5 338 aaKnown RBP19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 SRRDQ9UH36 339 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 NCKAP1Q9Y2A7 1128 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 COMMD10Q9Y6G5 202 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 HHLA1C9JL84 531 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 MOCS2O96007 188 aaPredicted RBP19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 GDF5P43026 501 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 ALDH9A1P49189 494 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 DGKEP52429 567 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 CRYBB1P53674 252 aaPredicted RBP19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 LRRC32Q14392 662 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 SNAPC1Q16533 368 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 TAGAPQ8N103 731 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 LRRC17Q8N6Y2 441 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 ZNF655Q8N720 491 aaPredicted RBP19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 BRI3BPQ8WY22 251 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 MS4A7Q9GZW8 240 aaPredicted RBP19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 MED28Q9H204 178 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 FAM105AQ9NUU6 356 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 NUDT4Q9NZJ9 180 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 FKBP7Q9Y680 259 aa19.75■□□□□ 0.75
TMEFF1-201ENST00000374879 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.74■□□□□ 0.75
TMEFF1-201ENST00000374879 SH3D21A4FU49 640 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms