RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ZNF551Q7Z340 670 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-202ENST00000374876 OR10Q1Q8NGQ4 319 aa14.89□□□□□ -0.03
CCDC40-202ENST00000374876 ASB12Q8WXK4 309 aa14.89□□□□□ -0.03
CCDC40-202ENST00000374876 DTD2Q96FN9 168 aa14.89□□□□□ -0.03
CCDC40-202ENST00000374876 ZCCHC2Q9C0B9 1178 aaKnown RBP14.89□□□□□ -0.03
CCDC40-202ENST00000374876 HS3ST3A1Q9Y663 406 aa14.89□□□□□ -0.03
CCDC40-202ENST00000374876 KCNE2Q9Y6J6 123 aa14.89□□□□□ -0.03
CCDC40-202ENST00000374876 LNP1A1A4G5 178 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 GDF9O60383 454 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 PCCBP05166 539 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 IGFALSP35858 605 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 WNT3P56703 355 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 SF1Q15637 639 aaKnown RBP14.88□□□□□ -0.03
CCDC40-202ENST00000374876 PRR23CQ6ZRP0 262 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 Q6ZSR6 202 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 CHST15Q7LFX5 561 aaPredicted RBP14.88□□□□□ -0.03
CCDC40-202ENST00000374876 HIPK1Q86Z02 1210 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 ZDHHC21Q8IVQ6 265 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 C1orf52Q8N6N3 182 aaKnown RBP14.88□□□□□ -0.03
CCDC40-202ENST00000374876 OR13H1Q8NG92 308 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 DTNBP1Q96EV8 351 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 KLHDC7BQ96G42 594 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 MBOAT4Q96T53 435 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 GTPBP2Q9BX10 602 aaKnown RBP14.88□□□□□ -0.03
CCDC40-202ENST00000374876 ADNPQ9H2P0 1102 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 C3orf18Q9UK00 162 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 ORC6Q9Y5N6 252 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 SNX11Q9Y5W9 270 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 U3KQV3 271 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 K7ESM1 405 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 TLR4O00206 839 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 ARHGAP33O14559 1287 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 SCN2BO60939 215 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 LRP3O75074 770 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 SH3BGRLO75368 114 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 ANXA4P09525 319 aaPredicted RBP14.88□□□□□ -0.03
CCDC40-202ENST00000374876 THEGLP0DJG4 465 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 LAMP1P11279 417 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 ASMTP46597 345 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 C21orf59P57076 290 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 C21orf58P58505 322 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 PCDH1Q08174 1060 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 RAB39AQ14964 217 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 AGERQ15109 404 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 TEAD4Q15561 434 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 NEDD8Q15843 81 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 VMACQ2NL98 169 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 ANKRD26P1Q6NSI1 321 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 ERICH5Q6P6B1 374 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 ZNF773Q6PK81 442 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 RABEPKQ7Z6M1 372 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 TMEM179BQ7Z7N9 219 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 NLRP8Q86W28 1048 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 SYTL1Q8IYJ3 562 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 CFAP206Q8IYR0 622 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 CLECL1Q8IZS7 167 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 OR7G3Q8NG95 312 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 HUS1BQ8NHY5 278 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 NUS1Q96E22 293 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 DUSP26Q9BV47 211 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 C1QTNF7Q9BXJ2 289 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 AMBRA1Q9C0C7 1298 aa14.88□□□□□ -0.03
CCDC40-202ENST00000374876 CACNA1EQ15878 2313 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 SCAMP2O15127 329 aaKnown RBP14.87□□□□□ -0.03
CCDC40-202ENST00000374876 B4GAT1O43505 415 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 KCNK5O95279 499 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 C1orf105O95561 183 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 ETHE1O95571 254 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 GPX2P18283 190 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 PRKACGP22612 351 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 KCNAB2Q13303 367 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 SPIN4Q56A73 249 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 RBM48Q5RL73 367 aaKnown RBP14.87□□□□□ -0.03
CCDC40-202ENST00000374876 CPTPQ5TA50 214 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 ADNP2Q6IQ32 1131 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 CAPN13Q6MZZ7 669 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-202ENST00000374876 TMPRSS11BQ86T26 416 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 TRIM74Q86UV6 250 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 TRAPPC5Q8IUR0 188 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 ZZZ3Q8IYH5 903 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 ARL10Q8N8L6 244 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 VPS37AQ8NEZ2 397 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 NEIL2Q969S2 332 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 SH3KBP1Q96B97 665 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 C12orf43Q96C57 262 aaKnown RBP14.87□□□□□ -0.03
CCDC40-202ENST00000374876 REPS1Q96D71 796 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 C11orf24Q96F05 449 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-202ENST00000374876 OR2AG1Q9H205 316 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 RPS6KA6Q9UK32 745 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 CDC14AQ9UNH5 594 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 MAPRE3Q9UPY8 281 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 OR1A2Q9Y585 309 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 A0A1B0GVG6 124 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 GNG14A0A1W2PPG7 69 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 MGAT4DA6NG13 374 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 C1QCP02747 245 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 HPCAL1P37235 193 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 PIGAP37287 484 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 MAGEA2P43356 314 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 PNLIPRP1P54315 467 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms