RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 FOXE1O00358 373 aaPredicted RBP22.79■■□□□ 1.24
CDK9-201ENST00000373264 ANKRD13BQ86YJ7 626 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 FBXO15Q8NCQ5 510 aaPredicted RBP22.79■■□□□ 1.24
CDK9-201ENST00000373264 OR9Q2Q8NGE9 314 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 SP7Q8TDD2 431 aaPredicted RBP22.79■■□□□ 1.24
CDK9-201ENST00000373264 SMG7Q92540 1137 aaKnown RBP22.79■■□□□ 1.24
CDK9-201ENST00000373264 UCN3Q969E3 161 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 BORCS5Q969J3 196 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 REPS1Q96D71 796 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 TAAR2Q9P1P5 351 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 PNMA8BQ9ULN7 279 aaPredicted RBP22.79■■□□□ 1.24
CDK9-201ENST00000373264 RNF6Q9Y252 685 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 SNX8Q9Y5X2 465 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 PRAMEF33A0A0G2JMD5 474 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 PRAMEF10O60809 474 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 ACVR2AP27037 513 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 CHI3L1P36222 383 aaPredicted RBP22.79■■□□□ 1.24
CDK9-201ENST00000373264 SLC19A1P41440 591 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 PDE7AQ13946 482 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 PRAMEF14Q5SWL7 426 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 GCNT6Q5T4J0 391 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 PRAMEF13Q5VWM6 474 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 Q6ZNX1 250 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 TSPYL5Q86VY4 417 aaPredicted RBP22.79■■□□□ 1.24
CDK9-201ENST00000373264 CROCCP3Q8IVE0 287 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 OR2L2Q8NH16 312 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 SLAMF7Q9NQ25 335 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 DEC1Q9P2X7 70 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 TAC3Q9UHF0 121 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 PADI2Q9Y2J8 665 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 SH3GLB1Q9Y371 365 aa22.79■■□□□ 1.24
CDK9-201ENST00000373264 GPR37L1O60883 481 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 TPP2P29144 1249 aaPredicted RBP22.78■■□□□ 1.24
CDK9-201ENST00000373264 WASP42768 502 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 PRIM2P49643 509 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 NCS1P62166 190 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 PPIGQ13427 754 aaKnown RBP eCLIP22.78■■□□□ 1.241e-6■■□□□ 12.9
CDK9-201ENST00000373264 GANABQ14697 944 aaKnown RBP22.78■■□□□ 1.24
CDK9-201ENST00000373264 CLCA4Q14CN2 919 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 EXOC3L2Q2M3D2 409 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 C16orf87Q6PH81 154 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 ADGRF3Q8IZF5 1079 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 NLGN4XQ8N0W4 816 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 METTL4Q8N3J2 472 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 EPYCQ99645 322 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 RSPO3Q9BXY4 272 aaPredicted RBP22.78■■□□□ 1.24
CDK9-201ENST00000373264 HCN2Q9UL51 889 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 TPRKBQ9Y3C4 175 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 SNX11Q9Y5W9 270 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 TRPM6Q9BX84 2022 aa22.78■■□□□ 1.24
CDK9-201ENST00000373264 PCCBP05166 539 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 HNRNPA1P09651 372 aaKnown RBP eCLIP22.77■■□□□ 1.24
CDK9-201ENST00000373264 PCSK2P16519 638 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 HOXB6P17509 224 aaKnown RBP22.77■■□□□ 1.24
CDK9-201ENST00000373264 C21orf33P30042 268 aaPredicted RBP22.77■■□□□ 1.24
CDK9-201ENST00000373264 IDUAP35475 653 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 P2RY2P41231 377 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 IL12RB1P42701 662 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 NUDT6P53370 316 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 SPIBQ01892 262 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 OCA2Q04671 838 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 RPS26P11Q5JNZ5 115 aaPredicted RBP22.77■■□□□ 1.24
CDK9-201ENST00000373264 PAGE2BQ5JRK9 111 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 TMIGD1Q6UXZ0 262 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 ANKRD53Q8N9V6 530 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 OR52N2Q8NGI0 321 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 GOT1L1Q8NHS2 421 aaPredicted RBP22.77■■□□□ 1.24
CDK9-201ENST00000373264 WFIKKN2Q8TEU8 576 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 PROX1Q92786 737 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 POP5Q969H6 163 aaKnown RBP22.77■■□□□ 1.24
CDK9-201ENST00000373264 F2RL3Q96RI0 385 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 ZCCHC2Q9C0B9 1178 aaKnown RBP22.77■■□□□ 1.24
CDK9-201ENST00000373264 ARMC7Q9H6L4 198 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 ACOT13Q9NPJ3 140 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 TBC1D23Q9NUY8 699 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 PCDHGB3Q9Y5G1 929 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 GRXCR1A8MXD5 290 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 FAM227AF5H4B4 570 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 LATO43561 262 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 STATHP02808 62 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 CNTN1Q12860 1018 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 ATP1A4Q13733 1029 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 ELAVL3Q14576 367 aaKnown RBP22.77■■□□□ 1.24
CDK9-201ENST00000373264 HIST2H2ACQ16777 129 aaPredicted RBP22.77■■□□□ 1.24
CDK9-201ENST00000373264 TMEM236Q5W0B7 351 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 HIST2H2AA3Q6FI13 130 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 HEATR4Q86WZ0 1026 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 CCDC103Q8IW40 242 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 CXorf36Q9H7Y0 433 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 SCN3BQ9NY72 215 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 PCDHGB1Q9Y5G3 927 aa22.77■■□□□ 1.24
CDK9-201ENST00000373264 EDDM13A0A1B0GTR0 161 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 A0A1W2PRB8 838 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 PLPP1O14494 284 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 PPIBP23284 216 aaKnown RBP22.76■■□□□ 1.23
CDK9-201ENST00000373264 EEF1A2Q05639 463 aaKnown RBP22.76■■□□□ 1.23
CDK9-201ENST00000373264 ELP6Q0PNE2 266 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 PLD3Q8IV08 490 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 ZNF784Q8NCA9 323 aaPredicted RBP22.76■■□□□ 1.23
CDK9-201ENST00000373264 TMIEQ8NEW7 156 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms