RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ACTA2P62736 377 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 ACTG2P63267 376 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 SPOCK1Q08629 439 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 NOMO2Q5JPE7 1267 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 ASRGL1Q7L266 308 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 ZSWIM9Q86XI8 627 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 BOLLQ8N9W6 283 aaKnown RBP14.78□□□□□ -0.04
COL5A1-201ENST00000371817 FCRL2Q96LA5 508 aaPredicted RBP14.78□□□□□ -0.04
COL5A1-201ENST00000371817 AGPAT2O15120 278 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 FFAR2O15552 330 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 GOT2P00505 430 aaKnown RBP14.78□□□□□ -0.04
COL5A1-201ENST00000371817 ALDOBP05062 364 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 BCHEP06276 602 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 HTR7P34969 479 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 ACTC1P68032 377 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 ACTA1P68133 377 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 KCT2Q8NC54 265 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 BTBD2Q9BX70 525 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 SDCBP2Q9H190 292 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 RNF121Q9H920 327 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 KCNQ5Q9NR82 932 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 CLTCL1P53675 1640 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 POLR2HP52434 150 aaKnown RBP14.78□□□□□ -0.04
COL5A1-201ENST00000371817 GTF2H5Q6ZYL4 71 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 FANK1Q8TC84 345 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 FAM83CQ9BQN1 747 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 CDC14AQ9UNH5 594 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 DIRAS1O95057 198 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 CES5AQ6NT32 575 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 CFAP77Q6ZQR2 320 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 MGLLQ99685 303 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 MTFR1LQ9H019 292 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 QRSL1Q9H0R6 528 aaKnown RBP14.77□□□□□ -0.04
COL5A1-201ENST00000371817 NMUR1Q9HB89 426 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 VPS29Q9UBQ0 182 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 NKRFO15226 690 aaKnown RBP eCLIP14.77□□□□□ -0.04
COL5A1-201ENST00000371817 PMS2P3Q13401 168 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 MAPK15Q8TD08 544 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 METTL21AQ8WXB1 218 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 EEF1E1-BLOC1S5C9J1V9 151 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 TREHO43280 583 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 SLC22A5O76082 557 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 PIGRP01833 764 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 HLCSP50747 726 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 RAB8AP61006 207 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 GALK2Q01415 458 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 GRIK2Q13002 908 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 SPHARQ15513 63 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 FAM199XQ6PEV8 388 aaPredicted RBP14.77□□□□□ -0.04
COL5A1-201ENST00000371817 FAM129CQ86XR2 697 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 GPR135Q8IZ08 494 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 PYCR2Q96C36 320 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 GPRC5BQ9NZH0 403 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 ZDHHC2Q9UIJ5 367 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 KCNS2Q9ULS6 477 aa14.77□□□□□ -0.04
COL5A1-201ENST00000371817 CD8B2A6NJW9 211 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 SNRNP70P08621 437 aaKnown RBP14.77□□□□□ -0.05
COL5A1-201ENST00000371817 CD8BP10966 210 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 MYF6P23409 242 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 PTGER3P43115 390 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 CRISP1P54107 249 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 HIST2H3PS2Q5TEC6 136 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 NFKBIDQ8NI38 313 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 SLC38A1Q9H2H9 487 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 A0A1B0GVT2 93 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 KLRC4O43908 158 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 NR2C1P13056 603 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 SCNN1GP51170 649 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 PCBP1Q15365 356 aaKnown RBP eCLIP14.77□□□□□ -0.05
COL5A1-201ENST00000371817 CREB3L2Q70SY1 520 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 RASGRP3Q8IV61 690 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 FAM83FQ8NEG4 500 aaPredicted RBP14.77□□□□□ -0.05
COL5A1-201ENST00000371817 FZD3Q9NPG1 666 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 LRRC72A6NJI9 287 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 KCNAB2Q13303 367 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 GPR68Q15743 365 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 AVPI1Q5T686 147 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 SLC9B2Q86UD5 537 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 KLHL9Q9P2J3 617 aa14.77□□□□□ -0.05
COL5A1-201ENST00000371817 C17orf113A0A1B0GUU1 675 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 LYRM1O43325 122 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 SOX30O94993 753 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 MBP02144 154 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 S1PR1P21453 382 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 RPS27AP62979 156 aaKnown RBP14.76□□□□□ -0.05
COL5A1-201ENST00000371817 UBA52P62987 128 aaKnown RBP14.76□□□□□ -0.05
COL5A1-201ENST00000371817 TLE1Q04724 770 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 CYBRD1Q53TN4 286 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 DRICH1Q6PGQ1 229 aaPredicted RBP14.76□□□□□ -0.05
COL5A1-201ENST00000371817 SLC22A25Q6T423 547 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 SMIM15Q7Z3B0 74 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 DCUN1D3Q8IWE4 304 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 SLC45A3Q96JT2 553 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 YDJCA8MPS7 323 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 C6orf89Q6UWU4 347 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 KCTD20Q7Z5Y7 419 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 ACOT11Q8WXI4 607 aaPredicted RBP14.76□□□□□ -0.05
COL5A1-201ENST00000371817 DLGAP4Q9Y2H0 992 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 RAI2Q9Y5P3 530 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 B3GALT2O43825 422 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms