RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 R3HCC1LQ7Z5L2 792 aaKnown RBP22.72■■□□□ 1.23
SNX3-203ENST00000368979 HPS6Q86YV9 775 aa22.72■■□□□ 1.23
SNX3-203ENST00000368979 ZCCHC7Q8N3Z6 543 aaKnown RBP22.72■■□□□ 1.23
SNX3-203ENST00000368979 UTP15Q8TED0 518 aaKnown RBP22.72■■□□□ 1.23
SNX3-203ENST00000368979 CCDC74AQ96AQ1 378 aa22.72■■□□□ 1.23
SNX3-203ENST00000368979 ZDHHC12Q96GR4 267 aa22.72■■□□□ 1.23
SNX3-203ENST00000368979 TCTN2Q96GX1 697 aa22.72■■□□□ 1.23
SNX3-203ENST00000368979 AHCYL2Q96HN2 611 aaKnown RBP22.72■■□□□ 1.23
SNX3-203ENST00000368979 PRPF18Q99633 342 aaKnown RBP22.72■■□□□ 1.23
SNX3-203ENST00000368979 DUSP26Q9BV47 211 aa22.72■■□□□ 1.23
SNX3-203ENST00000368979 KCNH6Q9H252 994 aa22.72■■□□□ 1.23
SNX3-203ENST00000368979 ARRDC1-AS1Q9H2J1 176 aa22.72■■□□□ 1.23
SNX3-203ENST00000368979 DENND2DQ9H6A0 471 aaPredicted RBP22.72■■□□□ 1.23
SNX3-203ENST00000368979 GMEB2Q9UKD1 530 aa22.72■■□□□ 1.23
SNX3-203ENST00000368979 PACSIN3Q9UKS6 424 aa22.72■■□□□ 1.23
SNX3-203ENST00000368979 KIF1CO43896 1103 aaKnown RBP22.71■■□□□ 1.23
SNX3-203ENST00000368979 PCDHGA12O60330 932 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 SORBS2O94875 1100 aaKnown RBP22.71■■□□□ 1.23
SNX3-203ENST00000368979 B3GALT4O96024 378 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 SMIM10L1P0DMW3 83 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 ATP5A1P25705 553 aaKnown RBP22.71■■□□□ 1.23
SNX3-203ENST00000368979 PPM1FP49593 454 aaPredicted RBP22.71■■□□□ 1.23
SNX3-203ENST00000368979 SLC7A2P52569 658 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 HNRNPFP52597 415 aaKnown RBP22.71■■□□□ 1.23
SNX3-203ENST00000368979 RAB8AP61006 207 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 ZNF385BQ569K4 471 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 MANEAQ5SRI9 462 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 LRIF1Q5T3J3 769 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 MRM1Q6IN84 353 aaKnown RBP22.71■■□□□ 1.23
SNX3-203ENST00000368979 KIAA2013Q8IYS2 634 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 DNAJC22Q8N4W6 341 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 OR8K5Q8NH50 307 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 DNAJB8Q8NHS0 232 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 SMIM10Q96HG1 83 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 ITCHQ96J02 903 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 ADA2Q9NZK5 511 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 R4GN57 208 aa22.71■■□□□ 1.23
SNX3-203ENST00000368979 URADA6NGE7 173 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 HCRTR1O43613 425 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 CIB2O75838 187 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 C9P02748 559 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 ZNF888P0CJ79 500 aaPredicted RBP22.7■■□□□ 1.22
SNX3-203ENST00000368979 CFHR1Q03591 330 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 ZC3H12BQ5HYM0 836 aaKnown RBP22.7■■□□□ 1.22
SNX3-203ENST00000368979 C6orf10Q5SRN2 563 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 CYB5D1Q6P9G0 228 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 ZC3H14Q6PJT7 736 aaKnown RBP22.7■■□□□ 1.22
SNX3-203ENST00000368979 DGLUCYQ7Z3D6 616 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 NET1Q7Z628 596 aaPredicted RBP22.7■■□□□ 1.22
SNX3-203ENST00000368979 SPRED1Q7Z699 444 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 SLC15A3Q8IY34 581 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 CARFQ8N187 725 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 ZNF655Q8N720 491 aaPredicted RBP22.7■■□□□ 1.22
SNX3-203ENST00000368979 ACOT4Q8N9L9 421 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 WDR60Q8WVS4 1066 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 CGREF1Q99674 301 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 BHLHE41Q9C0J9 482 aaPredicted RBP22.7■■□□□ 1.22
SNX3-203ENST00000368979 CHRNA10Q9GZZ6 450 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 PAIP1Q9H074 479 aaKnown RBP22.7■■□□□ 1.22
SNX3-203ENST00000368979 SMOC1Q9H4F8 434 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 PCDHA9Q9Y5H5 950 aa22.7■■□□□ 1.22
SNX3-203ENST00000368979 MN1Q10571 1320 aaPredicted RBP22.7■■□□□ 1.22
SNX3-203ENST00000368979 A0A096LPI6 279 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 TRBV5-3A0A0A0MS03 114 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 C15orf38-AP3S2A0A0A6YYH1 394 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 IGHV5-51A0A0C4DH38 117 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 ZSCAN9O15535 394 aaPredicted RBP22.69■■□□□ 1.22
SNX3-203ENST00000368979 TBX19O60806 448 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 HOXB9P17482 250 aaPredicted RBP22.69■■□□□ 1.22
SNX3-203ENST00000368979 ENGP17813 658 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 DDCP20711 480 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 CD1CP29017 333 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 CSF2RBP32927 897 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 SNRPNP63162 240 aaKnown RBP22.69■■□□□ 1.22
SNX3-203ENST00000368979 PLIN5Q00G26 463 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 CCDC6Q16204 474 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 ARPINQ7Z6K5 226 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 MMP21Q8N119 569 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 EID2Q8N6I1 236 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 CSNK1A1LQ8N752 337 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 Q8N9G6 341 aaPredicted RBP22.69■■□□□ 1.22
SNX3-203ENST00000368979 DNAJB14Q8TBM8 379 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 TMEM125Q96AQ2 219 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 PPCDCQ96CD2 204 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 ATAD3AQ9NVI7 634 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 CMTM6Q9NX76 183 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 CD300AQ9UGN4 299 aa22.69■■□□□ 1.22
SNX3-203ENST00000368979 NME4O00746 187 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 MGRN1O60291 552 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 ERN1O75460 977 aaKnown RBP22.68■■□□□ 1.22
SNX3-203ENST00000368979 FAM58BPP0C7Q3 252 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 CERS1P27544 350 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 GABRA4P48169 554 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 VSX2P58304 361 aaPredicted RBP22.68■■□□□ 1.22
SNX3-203ENST00000368979 SLC9A5Q14940 896 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 HEPACAMQ14CZ8 416 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 DEFB110Q30KQ9 67 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 SAMD4BQ5PRF9 694 aaKnown RBP22.68■■□□□ 1.22
SNX3-203ENST00000368979 PLA2G2CQ5R387 149 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 WASHC2DQ5SRD0 308 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms