RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ERFP50548 548 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 PPP1CAP62136 330 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 HMGCS1Q01581 520 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 TBL3Q12788 808 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 CHIT1Q13231 466 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 GPR18Q14330 331 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 KPNB1Q14974 876 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 MAPRE2Q15555 327 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 SNCBQ16143 134 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 IMPG1Q17R60 797 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 C6orf136Q5SQH8 315 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 PRAMEF9Q5VWM5 478 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 REP15Q6BDI9 236 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 CAPRIN2Q6IMN6 1127 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 TTC23LQ6PF05 361 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 SYTL1Q8IYJ3 562 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 DSELQ8IZU8 1212 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 TEX19Q8NA77 164 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 WDR60Q8WVS4 1066 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 ATL1Q8WXF7 558 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 IL17FQ96PD4 163 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 TIMM29Q9BSF4 260 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 SLC29A3Q9BZD2 475 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 OR52A5Q9H2C5 316 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 OSGEPL1Q9H4B0 414 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 EFCAB1Q9HAE3 211 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 LHX9Q9NQ69 397 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 INTS7Q9NVH2 962 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 AIG1Q9NVV5 245 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 KCND3Q9UK17 655 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 PACSIN3Q9UKS6 424 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 PADI1Q9ULC6 663 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 ASF1AQ9Y294 204 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 WDR37Q9Y2I8 494 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 POLR3HQ9Y535 204 aaPredicted RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 KCNE1BA0A087WTH5 132 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 IGHV5-51A0A0C4DH38 117 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 CDC14CA4D256 554 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 E7EQ34 232 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 SLC28A1O00337 649 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 FBP2O00757 339 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 RGS14O43566 566 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 ENTPD5O75356 428 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 ULK1O75385 1050 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 PDYNP01213 254 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 KRT6AP02538 564 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 KRT6BP04259 564 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 RNF224P0DH78 156 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 IDO1P14902 403 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 FOLR1P15328 257 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 AMD1P17707 334 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 ACADLP28330 430 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 CAPZBP47756 277 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 KRT6CP48668 564 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 NEK2P51955 445 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 UFM1P61960 85 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 ERVK-8P63133 956 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 RPL38P63173 70 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 IRF8Q02556 426 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 PLOD1Q02809 727 aaPredicted RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 PRKG2Q13237 762 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 DNASE1L3Q13609 305 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 GSTA3Q16772 222 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 AP5B1Q2VPB7 878 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 C4orf17Q53FE4 359 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 XKR6Q5GH73 641 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 CACHD1Q5VU97 1274 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 OGFOD2Q6N063 350 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 PWWP2BQ6NUJ5 590 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 DUS1LQ6P1R4 473 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 FAM199XQ6PEV8 388 aaPredicted RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 C16orf89Q6UX73 402 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 FUNDC1Q8IVP5 155 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 RNF175Q8N4F7 328 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 C2orf73Q8N5S3 287 aaPredicted RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 OR5AR1Q8NGP9 310 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 OR9A1PQ8NGU1 263 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 CT55Q8WUE5 264 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 CCDC124Q96CT7 223 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 SLC41A2Q96JW4 573 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 OR4K3Q96R72 315 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 NRTNQ99748 197 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 CCT7Q99832 543 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 SLC25A23Q9BV35 468 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 MRPL1Q9BYD6 325 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 MMADHCQ9H3L0 296 aaPredicted RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 ELOVL6Q9H5J4 265 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 WDR41Q9HAD4 459 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 POT1Q9NUX5 634 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 SLC7A8Q9UHI5 535 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 GPR45Q9Y5Y3 372 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 ICE1Q9Y2F5 2266 aa9.5□□□□□ -0.89
TPM3-210ENST00000368530 PIPSLA2A3N6 862 aa9.5□□□□□ -0.89
TPM3-210ENST00000368530 C21orf140B9A014 251 aa9.5□□□□□ -0.89
TPM3-210ENST00000368530 MRASO14807 208 aa9.5□□□□□ -0.89
TPM3-210ENST00000368530 LSM1O15116 133 aaKnown RBP9.5□□□□□ -0.89
TPM3-210ENST00000368530 SLC35G4P0C7Q5 338 aa9.5□□□□□ -0.89
TPM3-210ENST00000368530 VARSP26640 1264 aaKnown RBP9.5□□□□□ -0.89
TPM3-210ENST00000368530 RAP1GDS1P52306 607 aa9.5□□□□□ -0.89
TPM3-210ENST00000368530 TBPL1P62380 186 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms