RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 TGIF2Q9GZN2 237 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 OR51B5Q9H339 312 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 GSTO2Q9H4Y5 243 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 RABEP2Q9H5N1 569 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 DMRT3Q9NQL9 472 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 PCDHGA11Q9Y5H2 935 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 OR2W5A6NFC9 320 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 ARGFXA6NJG6 315 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 SAP18O00422 153 aaKnown RBP14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 RTCAO00442 366 aaKnown RBP14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 CHST10O43529 356 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 OR4F21O95013 312 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 CPA3P15088 417 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 CCR10P46092 362 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 RPS13P62277 151 aaKnown RBP14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 BTN3A2P78410 334 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 ABHD17CQ6PCB6 329 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 MILR1Q7Z6M3 343 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 RAB43Q86YS6 212 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 CCNYL1Q8N7R7 359 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 OR2L5Q8NG80 312 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 RDH11Q8TC12 318 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 TCP10LQ8TDR4 215 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 MTFMTQ96DP5 389 aaKnown RBP14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 QRFPRQ96P65 431 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 TRIM55Q9BYV6 548 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 IQCGQ9H095 443 aaKnown RBP14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 PRM3Q9NNZ6 103 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 C14orf105Q9NVL8 296 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 OXSMQ9NWU1 459 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 C3orf18Q9UK00 162 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 HS3ST3B1Q9Y662 390 aa14.25□□□□□ -0.13
SMPDL3A-201ENST00000368440 CHD6Q8TD26 2715 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 ZFYVE26Q68DK2 2539 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 MAGEB17A8MXT2 336 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 IDSB3KWA1 339 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 ERVH48-1M5A8F1 160 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 SOCS6O14544 535 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 TYROBPO43914 113 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 DNAJB5O75953 348 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 ETHE1O95571 254 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 OTCP00480 354 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 FAM87AP0C7U9 286 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 MMP11P24347 488 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 CERS1P27544 350 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 GGTA1PQ4G0N0 100 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 FAAH2Q6GMR7 532 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 TRIM40Q6P9F5 258 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 ZNF793Q6ZN11 406 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 C10orf107Q8IVU9 208 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 THAP4Q8WY91 577 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 PKNOX2Q96KN3 472 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 SORBS1Q9BX66 1292 aaKnown RBP14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 TSC22D4Q9Y3Q8 395 aa14.24□□□□□ -0.13
SMPDL3A-201ENST00000368440 ALOX12BO75342 701 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 CDC123O75794 336 aaPredicted RBP14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 SERPINB1P30740 379 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 MDH1P40925 334 aaKnown RBP14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 PIK3CBP42338 1070 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 NAGLUP54802 743 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 RUNX2Q13950 521 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 MPP2Q14168 576 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 LY6DQ14210 128 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 TCHHL1Q5QJ38 904 aaPredicted RBP14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 KHDRBS2Q5VWX1 349 aaKnown RBP14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 CA13Q8N1Q1 262 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 EXD3Q8N9H8 876 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 C8orf44Q96CB5 159 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 CCDC126Q96EE4 140 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 CMTM7Q96FZ5 175 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 FAR2Q96K12 515 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 UBL7Q96S82 380 aaPredicted RBP14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 ZNF382Q96SR6 550 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 PAIP2Q9BPZ3 127 aaKnown RBP14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 MECRQ9BV79 373 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 VN1R1Q9GZP7 353 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 PRDM7Q9NQW5 492 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 LANCL2Q9NS86 450 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 SEMA3GQ9NS98 782 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 FARSBQ9NSD9 589 aaKnown RBP14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 P4HTMQ9NXG6 502 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 TRPS1Q9UHF7 1281 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 MKL2Q9ULH7 1088 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 UBFD1O14562 309 aaKnown RBP14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 HEXBP07686 556 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 EMP2P54851 167 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 POLE2P56282 527 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 DNAJB13P59910 316 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 SKP1P63208 163 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 DEPDC1Q5TB30 811 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 MFSD4BQ5TF39 518 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 KIRREL2Q6UWL6 708 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 AMER2Q8N7J2 671 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 CDYL2Q8N8U2 506 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 APOBEC4Q8WW27 367 aaKnown RBP14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 REPS1Q96D71 796 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 INTS9Q9NV88 658 aaKnown RBP14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 SENP1Q9P0U3 644 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 ADGRE2Q9UHX3 823 aa14.23□□□□□ -0.13
SMPDL3A-201ENST00000368440 MED13Q9UHV7 2174 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms