RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 PTCHD3Q3KNS1 767 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 NRROSQ86YC3 692 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.02□□□□□ -1.29
VTA1-202ENST00000367630 SGCDQ92629 289 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 HRASLS5Q96KN8 279 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 CCSER2Q9H7U1 834 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ZNF395Q9H8N7 513 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 SMURF1Q9HCE7 757 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 PCDHGB2Q9Y5G2 931 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 PRG2P13727 222 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 NCK1P16333 377 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 WEE1P30291 646 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 HNF1BP35680 557 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 TMIGD1Q6UXZ0 262 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 DCP2Q8IU60 420 aaKnown RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 RNF113BQ8IZP6 322 aaKnown RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 CHDHQ8NE62 594 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 ZFPM2Q8WW38 1151 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 CPNE2Q96FN4 548 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 PRR11Q96HE9 360 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 TIMM29Q9BSF4 260 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 INSL6Q9Y581 213 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 CDH10Q9Y6N8 788 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 A0A1B0GVI7 797 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 TCRBV5S2A0A599 114 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 CLEC3AO75596 197 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 CXCL14O95715 111 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ADH5P11766 374 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 CR2P20023 1033 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 NR4A2P43354 598 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ARL4DP49703 201 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 GBX2P52951 348 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 RPS7P62081 194 aaKnown RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 FAM117BQ6P1L5 589 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 RIMKLAQ8IXN7 391 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ZNF527Q8NB42 609 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 SLC2A12Q8TD20 617 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 GTF2H4Q92759 462 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 CMTM3Q96MX0 182 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 AASSQ9UDR5 926 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 PIAS1O75925 651 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 SERPIND1P05546 499 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ITGB7P26010 798 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 RGS8P57771 180 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 MTAPQ13126 283 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 CRB2Q5IJ48 1285 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 MANEAQ5SRI9 462 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 UBAP2Q5T6F2 1119 aaKnown RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 RNF19BQ6ZMZ0 732 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 USP30Q70CQ3 517 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 LRRC56Q8IYG6 542 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 EFCAB3Q8N7B9 438 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ZNF248Q8NDW4 579 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 C17orf50Q8WW18 174 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ASB11Q8WXH4 323 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ZNF578Q96N58 590 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 ERMAPQ96PL5 475 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 FERD3LQ96RJ6 166 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 FUNDC2Q9BWH2 189 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 DUS2Q9NX74 493 aaKnown RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 MARCH4Q9P2E8 410 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 RNF11Q9Y3C5 154 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 SLC6A6P31641 620 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 CSRP3P50461 194 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 MAB21L1Q13394 359 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ABRAXAS2Q15018 415 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 SLX4IPQ5VYV7 408 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 OR4F3Q6IEY1 312 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 TMEM64Q6YI46 380 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ZNF517Q6ZMY9 492 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 PM20D2Q8IYS1 436 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 SLC22A15Q8IZD6 547 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 DTWD1Q8N5C7 304 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 LGALS12Q96DT0 336 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 ZNF559Q9BR84 538 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 SPRTNQ9H040 489 aaPredicted RBP7.02□□□□□ -1.29
VTA1-202ENST00000367630 DPAGT1Q9H3H5 408 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 DSN1Q9H410 356 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 LOC100506127A0A0U1RQW1 187 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 TSPAN11A1L157 253 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 LRRC72A6NJI9 287 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 SLC22A31A6NKX4 558 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 ARHGEF33A8MVX0 844 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 LEFTY2O00292 366 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 PRSS23O95084 383 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 KCNC1P48547 511 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 SLC9A3P48764 834 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 OR4D2P58180 307 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 DGCR6Q14129 220 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 RGNQ15493 299 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 OCLNQ16625 522 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 PPP1R3AQ16821 1122 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 UGT3A2Q3SY77 523 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 C3orf38Q5JPI3 329 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 CTSL3PQ5NE16 218 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 CFAP52Q8N1V2 620 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 PHOSPHO2Q8TCD6 241 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 GRIN3AQ8TCU5 1115 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 PROKR1Q8TCW9 393 aa7.01□□□□□ -1.29
VTA1-202ENST00000367630 KCNC2Q96PR1 638 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms