RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 TIA1P31483 386 aaKnown RBP eCLIP11.15□□□□□ -0.62
SYNE1-204ENST00000367248 P2RY2P41231 377 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 ATP4BP51164 291 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 PGGT1BP53609 377 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 DAG1Q14118 895 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 KIAA0319Q5VV43 1072 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 RAET1LQ5VY80 246 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 RBM44Q6ZP01 1051 aaKnown RBP11.15□□□□□ -0.62
SYNE1-204ENST00000367248 LRRC46Q96FV0 321 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 SLC39A13Q96H72 371 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 RDH14Q9HBH5 336 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 BTBD3Q9Y2F9 522 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 RGPD2P0DJD1 1756 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 C4AP0C0L4 1744 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 BLOC1S5-TXNDC5H3BN57 136 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 EI24O14681 340 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 ECDO95905 644 aaPredicted RBP11.15□□□□□ -0.62
SYNE1-204ENST00000367248 CYB5AP00167 134 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 H1F0P07305 194 aaKnown RBP11.15□□□□□ -0.62
SYNE1-204ENST00000367248 IL1RNP18510 177 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 HSF2Q03933 536 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 TRIM61Q5EBN2 209 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 HDDC2Q7Z4H3 204 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 CSNK1A1LQ8N752 337 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 CAPSLQ8WWF8 208 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 CXCL16Q9H2A7 254 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 TAS2R9Q9NYW1 312 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
SYNE1-204ENST00000367248 OR52A4PA6NMU1 304 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 PRSS56P0CW18 603 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 ITGB7P26010 798 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 PTGR1Q14914 329 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 C9orf50Q5SZB4 431 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 CARD17Q5XLA6 110 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 TCEAL6Q6IPX3 200 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 OR2L5Q8NG80 312 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 TMEM74Q96NL1 305 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 TBC1D17Q9HA65 648 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 CKLFQ9UBR5 152 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 WDR45Q9Y484 360 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 ACADVLP49748 655 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 EGFLAMQ63HQ2 1017 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 PKP4Q99569 1192 aa11.15□□□□□ -0.62
SYNE1-204ENST00000367248 ZNF208O43345 1280 aa11.15□□□□□ -0.63
SYNE1-204ENST00000367248 KHDRBS3O75525 346 aaKnown RBP11.15□□□□□ -0.63
SYNE1-204ENST00000367248 IL3P08700 152 aa11.15□□□□□ -0.63
SYNE1-204ENST00000367248 GSTM3P21266 225 aa11.15□□□□□ -0.63
SYNE1-204ENST00000367248 CATSPEREQ5SY80 951 aa11.15□□□□□ -0.63
SYNE1-204ENST00000367248 TPK1Q9H3S4 243 aa11.15□□□□□ -0.63
SYNE1-204ENST00000367248 COQ10BQ9H8M1 238 aa11.15□□□□□ -0.63
SYNE1-204ENST00000367248 PSMA1P25786 263 aaKnown RBP11.14□□□□□ -0.63
SYNE1-204ENST00000367248 NSDHLQ15738 373 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 MZT2BQ6NZ67 158 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 NFKBIDQ8NI38 313 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 ARRDC2Q8TBH0 407 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 UBASH3BQ8TF42 649 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 SLC6A17Q9H1V8 727 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 SMURF2Q9HAU4 748 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 GPC6Q9Y625 555 aaPredicted RBP11.14□□□□□ -0.63
SYNE1-204ENST00000367248 HAT1O14929 419 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 GJA4P35212 333 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 ODF4Q2M2E3 257 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 DPPA4Q7L190 304 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 LAPTM4BQ86VI4 370 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 ZFAND4Q86XD8 727 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 GPR26Q8NDV2 337 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 EPYCQ99645 322 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 TRIM2Q9C040 744 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 ZBP1Q9H171 429 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYNE1-204ENST00000367248 PDE10AQ9Y233 779 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 COMMD3-BMI1R4GMX3 469 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 FAM25EA8MYX2 175 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 BCKDHAP12694 445 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 ECHS1P30084 290 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 GSTT1P30711 240 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 RPA4Q13156 261 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 OR2T5Q6IEZ7 315 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 PARS2Q7L3T8 475 aaKnown RBP11.14□□□□□ -0.63
SYNE1-204ENST00000367248 IQCF2Q8IXL9 164 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 OR10H4Q8NGA5 316 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 OR2T29Q8NH02 315 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 SPPL3Q8TCT6 385 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 NODALQ96S42 347 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 TMEM138Q9NPI0 162 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 NOBOXO60393 691 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 CPNE3O75131 537 aaKnown RBP11.14□□□□□ -0.63
SYNE1-204ENST00000367248 XKP51811 444 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 ARFIP1P53367 373 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 ARG2P78540 354 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 MGAT3Q09327 533 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 GRIN2CQ14957 1233 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 F2RL3Q96RI0 385 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 NPIPA5E9PKD4 350 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 HCRTR2O43614 444 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 CD6P30203 668 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 CSNK1DP48730 415 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 MTTPP55157 894 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 CTBP2P56545 445 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 NR0B2Q15466 257 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 286.4 ms