RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 WDR20Q8TBZ3 569 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 PROKR1Q8TCW9 393 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 BSNDQ8WZ55 320 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 UPF1Q92900 1129 aaKnown RBP eCLIP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 BARD1Q99728 777 aaKnown RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 CRISPLD1Q9H336 500 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 C11orf16Q9NQ32 467 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 KLHL1Q9NR64 748 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 NUBP2Q9Y5Y2 271 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 PTGDR2Q9Y5Y4 395 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 PTCH2Q9Y6C5 1203 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 TCRBV16S1A1N1A0A5B0 115 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 H3BM21 787 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 TERTO14746 1132 aaKnown RBP11.15□□□□□ -0.62
CNOT4-203ENST00000361528 ADAMDEC1O15204 470 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 PPM1DO15297 605 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 PSMD3O43242 534 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 SDC3O75056 442 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 POP7O75817 140 aaKnown RBP11.15□□□□□ -0.62
CNOT4-203ENST00000361528 CDRT1O95170 752 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 MT-CYBP00156 380 aaPredicted RBP11.15□□□□□ -0.62
CNOT4-203ENST00000361528 ZDHHC11BP0C7U3 371 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 RNF224P0DH78 156 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 CYP2B6P20813 491 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 AGFG1P52594 562 aaKnown RBP11.15□□□□□ -0.62
CNOT4-203ENST00000361528 DEFA6Q01524 100 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 DSC2Q02487 901 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 PON3Q15166 354 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 PCID2Q5JVF3 399 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 SPOUT1Q5T280 376 aaKnown RBP11.15□□□□□ -0.62
CNOT4-203ENST00000361528 AVPI1Q5T686 147 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 KDELC2Q7Z4H8 507 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 TMEM17Q86X19 198 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 DENND1CQ8IV53 801 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 SULF1Q8IWU6 871 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 C12orf29Q8N999 325 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 OR10A6Q8NH74 314 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 DNAJB8Q8NHS0 232 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 KCNJ9Q92806 393 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 CPNE4Q96A23 557 aaPredicted RBP11.15□□□□□ -0.62
CNOT4-203ENST00000361528 PRMT8Q9NR22 394 aaPredicted RBP11.15□□□□□ -0.62
CNOT4-203ENST00000361528 PDGFCQ9NRA1 345 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 JAG2Q9Y219 1238 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 NEUROG3Q9Y4Z2 214 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 ASB1Q9Y576 335 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 USP3Q9Y6I4 520 aa11.15□□□□□ -0.62
CNOT4-203ENST00000361528 LCHNA4D1U4 455 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 SLC9B1P1A6NJY1 282 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 UBE2CO00762 179 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 GPR171O14626 319 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 PHYHO14832 338 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 NIPSNAP2O75323 286 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 S1PR4O95977 384 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 CST3P01034 146 aaPredicted RBP11.15□□□□□ -0.63
CNOT4-203ENST00000361528 GNRH1P01148 92 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 HRGP04196 525 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 HAPLN1P10915 354 aaPredicted RBP11.15□□□□□ -0.63
CNOT4-203ENST00000361528 GABRB1P18505 474 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 PAICSP22234 425 aaKnown RBP11.15□□□□□ -0.63
CNOT4-203ENST00000361528 SSTR4P31391 388 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 ACSL1P33121 698 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 ARL4AP40617 200 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 SNX16P57768 344 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 ERVK-25P63136 954 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 GTF2H3Q13889 308 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 TSNQ15631 228 aaKnown RBP11.15□□□□□ -0.63
CNOT4-203ENST00000361528 INTS6LQ5JSJ4 861 aaKnown RBP11.15□□□□□ -0.63
CNOT4-203ENST00000361528 PLAG1Q6DJT9 500 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 OR6B2Q6IFH4 312 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 ZNF549Q6P9A3 640 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 IKBIPQ70UQ0 350 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 TAS1R3Q7RTX0 852 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 CCDC116Q8IYX3 515 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 CENPIQ92674 756 aaPredicted RBP11.15□□□□□ -0.63
CNOT4-203ENST00000361528 PGLYRP2Q96PD5 576 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 PKMYT1Q99640 499 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 THUMPD3Q9BV44 507 aaKnown RBP11.15□□□□□ -0.63
CNOT4-203ENST00000361528 GLOD4Q9HC38 313 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 B3GAT2Q9NPZ5 323 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 HEBP1Q9NRV9 189 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 THUMPD1Q9NXG2 353 aaKnown RBP11.15□□□□□ -0.63
CNOT4-203ENST00000361528 KLHL8Q9P2G9 620 aaPredicted RBP11.15□□□□□ -0.63
CNOT4-203ENST00000361528 GPR160Q9UJ42 338 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 BACE2Q9Y5Z0 518 aa11.15□□□□□ -0.63
CNOT4-203ENST00000361528 ANKDD1BA6NHY2 528 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 ARHGEF33A8MVX0 844 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 MYO1GB0I1T2 1018 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 DHX15O43143 795 aaKnown RBP11.14□□□□□ -0.63
CNOT4-203ENST00000361528 LILRB5O75023 590 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 STX11O75558 287 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 TPH1P17752 444 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 VAMP1P23763 118 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 ATP5A1P25705 553 aaKnown RBP11.14□□□□□ -0.63
CNOT4-203ENST00000361528 NOS2P35228 1153 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 NNMTP40261 264 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 ACTR1BP42025 376 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 TAS2R60P59551 318 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 MC2RQ01718 297 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 LCP2Q13094 533 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 GPR176Q14439 515 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms