RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 NKX2-5P52952 324 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-203ENST00000359759 COL9A3Q14050 684 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-203ENST00000359759 PXYLP1Q8TE99 480 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ATXN7L1Q9ULK2 861 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ANXA3P12429 323 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 IL7P13232 177 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ACVRL1P37023 503 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 RAB15P59190 212 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 SPANXN4Q5MJ08 99 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ERMP1Q7Z2K6 904 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 AUTS2Q8WXX7 1259 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 AURKBQ96GD4 344 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-203ENST00000359759 MAELQ96JY0 434 aaKnown RBP15.51■□□□□ 0.07
COL18A1-203ENST00000359759 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ACTR3BQ9P1U1 418 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 SYN3O14994 580 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 TNFP01375 233 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 CFHP08603 1231 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 PTGR1Q14914 329 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 PPP1R3AQ16821 1122 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ARHGAP40Q5TG30 622 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ZNF283Q8N7M2 679 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ERVK13-1Q9NX77 482 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 PCDHGB6Q9Y5F9 930 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 AGR2O95994 175 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 APOC3P02656 99 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 ZNF41P51814 821 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.5■□□□□ 0.072e-7■□□□□ 9.5
COL18A1-203ENST00000359759 CFAP77Q6ZQR2 320 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 FCRL5Q96RD9 977 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 DNAJB4Q9UDY4 337 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 TLR6Q9Y2C9 796 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 FRMPD1Q5SYB0 1578 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 BOLA2-SMG1P6H3BVE0 249 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 H7C417 338 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 AHSGP02765 367 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 C8AP07357 584 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 LASP1Q14847 261 aaKnown RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 DECR1Q16698 335 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 KANK2Q63ZY3 851 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 NPAS4Q8IUM7 802 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 SH3RF2Q8TEC5 729 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 OSTF1Q92882 214 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 TCEAL4Q96EI5 215 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 CMKLR1Q99788 373 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 TMEM121BQ9BXQ6 578 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 ZDHHC18Q9NUE0 388 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 CNOT4O95628 575 aaKnown RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 AGXTP21549 392 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 MAPK3P27361 379 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 SLC6A6P31641 620 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 ZNF829Q3KNS6 432 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 TMEM69Q5SWH9 247 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 GPR157Q5UAW9 335 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 ZNF584Q8IVC4 421 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 SLC22A17Q8WUG5 538 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 LRCH3Q96II8 777 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 POLMQ9NP87 494 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 POT1Q9NUX5 634 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 TMEM184CQ9NVA4 438 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 PTBP2Q9UKA9 531 aaKnown RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 KCTD3Q9Y597 815 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 FPR1P21462 350 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 AGTR2P50052 363 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 RAB4BP61018 213 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 GNMTQ14749 295 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 ZDHHC1Q8WTX9 485 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 ERVK-19Q9WJR5 959 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 CAPN5O15484 640 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 F8A1P23610 371 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 NAA10P41227 235 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 TXNRD3NBQ6F5E7 133 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 ELMOD2Q8IZ81 293 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 TMEM156Q8N614 296 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 REV1Q9UBZ9 1251 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 EXOSC1Q9Y3B2 195 aaKnown RBP15.5■□□□□ 0.07
COL18A1-203ENST00000359759 CDH10Q9Y6N8 788 aa15.5■□□□□ 0.07
COL18A1-203ENST00000359759 SNRPD2P62316 118 aaKnown RBP15.49■□□□□ 0.07
COL18A1-203ENST00000359759 DPYSL2Q16555 572 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 OR13C3Q8NGS6 347 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 CDKN2AIPNLQ96HQ2 116 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 Q9N2J8 555 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 COL5A2P05997 1499 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-203ENST00000359759 BORCS7-ASMTA0A0B4J1R7 106 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 LYPLA2O95372 231 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 PET100P0DJ07 73 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 RPL35P42766 123 aaKnown RBP15.49■□□□□ 0.07
COL18A1-203ENST00000359759 STT3AP46977 705 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 ZNF616Q08AN1 781 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 PTPRCAPQ14761 206 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 C7orf61Q8IZ16 206 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 PNPLA2Q96AD5 504 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 POLDIP3Q9BY77 421 aaKnown RBP15.49■□□□□ 0.07
COL18A1-203ENST00000359759 PAQR5Q9NXK6 330 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-203ENST00000359759 HTR2BP41595 481 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 RBM39Q14498 530 aaKnown RBP15.49■□□□□ 0.07
COL18A1-203ENST00000359759 C22orf42Q6IC83 251 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 NEIL3Q8TAT5 605 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 OR5B12Q96R08 314 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 NLGN3Q9NZ94 848 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms