RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PIGFQ07326 219 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 KLK6Q92876 244 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 IL12RB2Q99665 862 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 CARS2Q9HA77 564 aaKnown RBP14.34□□□□□ -0.11
CHD4-201ENST00000357008 YIPF1Q9Y548 306 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 HSPE1-MOB4S4R3N1 261 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 BOLA2-SMG1P6H3BVE0 249 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 FAAHO00519 579 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 FOSL2P15408 326 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 CHAF1BQ13112 559 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 CCBE1Q6UXH8 406 aaPredicted RBP14.34□□□□□ -0.11
CHD4-201ENST00000357008 C14orf119Q9NWQ9 140 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 CNTN5O94779 1100 aa14.33□□□□□ -0.11
CHD4-201ENST00000357008 SCGB1D2O95969 90 aa14.33□□□□□ -0.11
CHD4-201ENST00000357008 CSTBP04080 98 aaKnown RBP14.33□□□□□ -0.11
CHD4-201ENST00000357008 CD47Q08722 323 aa14.33□□□□□ -0.11
CHD4-201ENST00000357008 RBM12BQ8IXT5 1001 aaKnown RBP14.33□□□□□ -0.11
CHD4-201ENST00000357008 ZDHHC14Q8IZN3 488 aa14.33□□□□□ -0.11
CHD4-201ENST00000357008 MGLLQ99685 303 aa14.33□□□□□ -0.11
CHD4-201ENST00000357008 FAM118AQ9NWS6 357 aa14.33□□□□□ -0.11
CHD4-201ENST00000357008 CLCA1A8K7I4 914 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 UPK3BL1B0FP48 263 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 UPK3BL2E5RIL1 263 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 SCDO00767 359 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 LASP1Q14847 261 aaKnown RBP14.33□□□□□ -0.12
CHD4-201ENST00000357008 SLC35G1Q2M3R5 365 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 DEFB115Q30KQ5 88 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 GARNL3Q5VVW2 1013 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 LIPKQ5VXJ0 399 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 ANKRD26P1Q6NSI1 321 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 SLC27A4Q6P1M0 643 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.33□□□□□ -0.12
CHD4-201ENST00000357008 GBAP04062 536 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 PORP16435 677 aaPredicted RBP14.33□□□□□ -0.12
CHD4-201ENST00000357008 ZNF8P17098 575 aaPredicted RBP14.33□□□□□ -0.12
CHD4-201ENST00000357008 Q8N402 240 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 PIP5K1AQ99755 562 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 SMOXQ9NWM0 555 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 EBF1Q9UH73 591 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 IFT52Q9Y366 437 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 WDR45Q9Y484 360 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 A0A0J9YVX5 310 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 OR2B3O76000 313 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 IL3P08700 152 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 GSTM2P28161 218 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 KDELR2P33947 212 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 AFF1P51825 1210 aaKnown RBP14.33□□□□□ -0.12
CHD4-201ENST00000357008 ARF3P61204 181 aaPredicted RBP14.33□□□□□ -0.12
CHD4-201ENST00000357008 ARF1P84077 181 aaKnown RBP14.33□□□□□ -0.12
CHD4-201ENST00000357008 CLCA4Q14CN2 919 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 RHEBQ15382 184 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 UNC50Q53HI1 259 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 PLEKHS1Q5SXH7 462 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 LIPJQ5W064 366 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 ZFAND4Q86XD8 727 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 OR4K1Q8NGD4 311 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 MCHR1Q99705 422 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 CDC14AQ9UNH5 594 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 PCDHGA12O60330 932 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 SLC35E2BP0CK96 405 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 SRCP12931 536 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 HOXC12P31275 282 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 SLC6A9P48067 706 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 SEC13P55735 322 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 FADDQ13158 208 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 GPRC6AQ5T6X5 926 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 SMYD5Q6GMV2 418 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 OR51G2Q8NGK0 314 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 OR9A1PQ8NGU1 263 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 RPLP0P6Q8NHW5 317 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 ITPKCQ96DU7 683 aa14.33□□□□□ -0.12
CHD4-201ENST00000357008 TEX13DA0A0J9YY54 714 aaPredicted RBP14.32□□□□□ -0.12
CHD4-201ENST00000357008 A0A1W2PRU2 124 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 PLD2O14939 933 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 VILLO15195 856 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 OR7A10O76100 309 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 NR2C1P13056 603 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 NPR2P20594 1047 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 COQ5Q5HYK3 327 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 HAGHLQ6PII5 290 aaPredicted RBP14.32□□□□□ -0.12
CHD4-201ENST00000357008 BLOC1S3Q6QNY0 202 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 DCAF4L2Q8NA75 395 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 BBS10Q8TAM1 723 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 SGCDQ92629 289 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 MAGIXQ9H6Y5 334 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 PLEKHA6Q9Y2H5 1048 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 KIF1AQ12756 1690 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 C10orf71Q711Q0 1435 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 MYF6P23409 242 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 TMEM53Q6P2H8 277 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 Q6ZVU0 165 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 CMTR2Q8IYT2 770 aaKnown RBP14.32□□□□□ -0.12
CHD4-201ENST00000357008 MOAP1Q96BY2 351 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 ACTR6Q9GZN1 396 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 PNO1Q9NRX1 252 aaKnown RBP14.32□□□□□ -0.12
CHD4-201ENST00000357008 RBPJLQ9UBG7 517 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 C3P01024 1663 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 SLC35F4A4IF30 521 aa14.32□□□□□ -0.12
CHD4-201ENST00000357008 RFPL2O75678 378 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms