RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 MAN2A2P49641 1150 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 HMGN2P46Q86SG4 172 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 FANK1Q8TC84 345 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 SORCS1Q8WY21 1168 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 GLYATL1Q969I3 302 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 KIAA1143Q96AT1 154 aaPredicted RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 ZDHHC12Q96GR4 267 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 FCRL3Q96P31 734 aaPredicted RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 NPLQ9BXD5 320 aaPredicted RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 VNN3Q9NY84 501 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 ZNF806P0C7X5 589 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 OR12D1P0DN82 309 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 GABRA3P34903 492 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 TPTEP56180 551 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 PYHIN1Q6K0P9 492 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 REEP3Q6NUK4 255 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 TIFABQ6ZNK6 161 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 SLC6A15Q9H2J7 730 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 SMURF1Q9HCE7 757 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 SPATA6Q9NWH7 488 aaPredicted RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 NCDNQ9UBB6 729 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 PRDM4Q9UKN5 801 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 PCDHGA10Q9Y5H3 936 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 STYXL1Q9Y6J8 313 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 A0A1B0GVI7 797 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 MRPL3P09001 348 aaKnown RBP12.74□□□□□ -0.37
SCN8A-202ENST00000355133 ZNF16P17020 682 aaPredicted RBP12.74□□□□□ -0.37
SCN8A-202ENST00000355133 ACRV1P26436 265 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 RPS3AP61247 264 aaKnown RBP12.74□□□□□ -0.37
SCN8A-202ENST00000355133 MSANTD1Q6ZTZ1 278 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 ZNF227Q86WZ6 799 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 ZNF611Q8N823 705 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 NSUN5Q96P11 429 aaKnown RBP12.74□□□□□ -0.37
SCN8A-202ENST00000355133 TAS2R9Q9NYW1 312 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 HEPACAM2A8MVW5 462 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 TSPAN9O75954 239 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 PDYNP01213 254 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 DNAJB1P25685 340 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 S100A10P60903 97 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 NNATQ16517 81 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 PACRGLQ8N7B6 248 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 OR10T2Q8NGX3 314 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 OTUB2Q96DC9 234 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 FBXL20Q96IG2 436 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 WDR92Q96MX6 357 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 RBP7Q96R05 134 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 PAAF1Q9BRP4 392 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 PARPBPQ9NWS1 579 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 NLGN3Q9NZ94 848 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 HCN2Q9UL51 889 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 CA14Q9ULX7 337 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 BAIAP2Q9UQB8 552 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 MYOM1P52179 1685 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 SCO2O43819 266 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 ITIH1P19827 911 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 UQCRC2P22695 453 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 TTLL10Q6ZVT0 673 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 ASPGQ86U10 573 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 PAQR7Q86WK9 346 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 PLCZ1Q86YW0 608 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 TRAM1L1Q8N609 369 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 KRTCAP2Q8N6L1 136 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 TCEANCQ8N8B7 351 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 ZSCAN4Q8NAM6 433 aaPredicted RBP12.74□□□□□ -0.37
SCN8A-202ENST00000355133 OR8K3Q8NH51 312 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 DOK4Q8TEW6 326 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 IL17FQ96PD4 163 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 FARSAQ9Y285 508 aaKnown RBP12.74□□□□□ -0.37
SCN8A-202ENST00000355133 DIO3P55073 304 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 SLC36A4Q6YBV0 504 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 AMIGO3Q86WK7 504 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 SLC15A3Q8IY34 581 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 TMEM80Q96HE8 168 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 MRGPRX2Q96LB1 330 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 ZNF717Q9BY31 904 aaPredicted RBP12.74□□□□□ -0.37
SCN8A-202ENST00000355133 POLDIP3Q9BY77 421 aaKnown RBP12.74□□□□□ -0.37
SCN8A-202ENST00000355133 ARHGAP39Q9C0H5 1083 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 STRADBQ9C0K7 418 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 FZD3Q9NPG1 666 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 MED11Q9P086 117 aa12.74□□□□□ -0.37
SCN8A-202ENST00000355133 NKX1-2Q9UD57 310 aaPredicted RBP12.74□□□□□ -0.37
SCN8A-202ENST00000355133 A0A1W2PQU0 124 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 KLF11O14901 512 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 ARL6IP5O75915 188 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 IL3P08700 152 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 BNIP3Q12983 259 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 GNPDA2Q8TDQ7 276 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 IRF2BPLQ9H1B7 796 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 SFXN1Q9H9B4 322 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 TM9SF3Q9HD45 589 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 METTL21EPA6NDL7 271 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 HCRTR2O43614 444 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 IFNA21P01568 189 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 NADK2Q4G0N4 442 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 ARSJQ5FYB0 599 aaPredicted RBP12.73□□□□□ -0.37
SCN8A-202ENST00000355133 FIP1L1Q6UN15 594 aaKnown RBP12.73□□□□□ -0.37
SCN8A-202ENST00000355133 ZNF565Q8N9K5 539 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 INO80EQ8NBZ0 244 aaPredicted RBP12.73□□□□□ -0.37
SCN8A-202ENST00000355133 ACOT12Q8WYK0 555 aa12.73□□□□□ -0.37
SCN8A-202ENST00000355133 FKBP14Q9NWM8 211 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms