RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TBC1D3Q8IZP1 549 aaPredicted RBP7.87□□□□□ -1.15
CD44-205ENST00000352818 RNF148Q8N7C7 305 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TMEM102Q8N9M5 508 aaPredicted RBP7.87□□□□□ -1.15
CD44-205ENST00000352818 HIPK4Q8NE63 616 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 OR8J3Q8NGG0 315 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 WDR48Q8TAF3 677 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 SELENOMQ8WWX9 145 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 SLC45A3Q96JT2 553 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 C5orf34Q96MH7 638 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 SLC39A3Q9BRY0 314 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 EFHD1Q9BUP0 239 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 WRAP53Q9BUR4 548 aaKnown RBP7.87□□□□□ -1.15
CD44-205ENST00000352818 STRADBQ9C0K7 418 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 SYNDIG1Q9H7V2 258 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 FZD3Q9NPG1 666 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 EVA1BQ9NVM1 165 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 ARMC1Q9NVT9 282 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 STOX2Q9P2F5 926 aaPredicted RBP7.87□□□□□ -1.15
CD44-205ENST00000352818 PACSIN3Q9UKS6 424 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 KCNMB2Q9Y691 235 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 DNMT3AQ9Y6K1 912 aaPredicted RBP7.87□□□□□ -1.15
CD44-205ENST00000352818 PKDREJQ9NTG1 2253 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TDRD6O60522 2096 aaKnown RBP7.87□□□□□ -1.15
CD44-205ENST00000352818 H3BM21 787 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 STMND1H3BQB6 276 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 FFAR3O14843 346 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 CLGNO14967 610 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 INPP4BO15327 924 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 GPR42O15529 346 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 PRMT3O60678 531 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 PRAMEF4O60810 478 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 MMP20O60882 483 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 C1orf105O95561 183 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 PDYNP01213 254 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 CSF2P04141 144 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 GPIP06744 558 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 RPSAP08865 295 aaKnown RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 UMPSP11172 480 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 PIM1P11309 404 aaPredicted RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 SLC2A4P14672 509 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 NME1P15531 152 aaKnown RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 ATP6V1B2P21281 511 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 C5AR1P21730 350 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 IMPA1P29218 277 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 GSK3BP49841 420 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 ERFP50548 548 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 CLDN2P57739 230 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 HMGCS1Q01581 520 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 KLC1Q07866 573 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 CNTN1Q12860 1018 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 CHIT1Q13231 466 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 PWP1Q13610 501 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 BLMHQ13867 455 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 INPP5AQ14642 412 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 INPP5JQ15735 1006 aaPredicted RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 DPY19L1Q2PZI1 675 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 MTX3Q5HYI7 312 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 PAGE3Q5JUK9 113 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 ZNF648Q5T619 568 aaPredicted RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 AGBL4Q5VU57 503 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 PRAMEF9Q5VWM5 478 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 FRG2Q64ET8 278 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 AGTRAPQ6RW13 159 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 DLEU7Q6UYE1 221 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 GCNT7Q6ZNI0 430 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 THOC6Q86W42 341 aaKnown RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 TRIM69Q86WT6 500 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 HID1Q8IV36 788 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 APLFQ8IW19 511 aaPredicted RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 LILRA2Q8N149 483 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 LIX1Q8N485 282 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 BEND7Q8N7W2 519 aaPredicted RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 Q8NA96 180 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 FAM156AQ8NDB6 213 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 OR2L2Q8NH16 312 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 SKA2Q8WVK7 121 aaPredicted RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 SLC13A3Q8WWT9 602 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 STARD8Q92502 1023 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 POP5Q969H6 163 aaKnown RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 VPS33AQ96AX1 596 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 TESCQ96BS2 214 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 WDR34Q96EX3 536 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 LRGUKQ96M69 825 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 CCDC115Q96NT0 180 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 FRG2BQ96QU4 278 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 PKP4Q99569 1192 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 CGREF1Q99674 301 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 TMUB1Q9BVT8 246 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 DPY30Q9C005 99 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 TCEAL2Q9H3H9 227 aaPredicted RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 EHD1Q9H4M9 534 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 ELOVL6Q9H5J4 265 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 BRF2Q9HAW0 419 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 FARSBQ9NSD9 589 aaKnown RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 ATXN10Q9UBB4 475 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 PNMA8BQ9ULN7 279 aaPredicted RBP7.86□□□□□ -1.15
CD44-205ENST00000352818 MAPRE3Q9UPY8 281 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 COQ6Q9Y2Z9 468 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 DTNAQ9Y4J8 743 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms