RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 VWA5B2Q8N398 1253 aa17.11■□□□□ 0.33
APP-202ENST00000348990 UCK2Q9BZX2 261 aa17.11■□□□□ 0.33
APP-202ENST00000348990 HHATLQ9HCP6 504 aa17.11■□□□□ 0.33
APP-202ENST00000348990 RUVBL1Q9Y265 456 aaKnown RBP17.11■□□□□ 0.33
APP-202ENST00000348990 A0A075B6Q4 140 aa17.1■□□□□ 0.33
APP-202ENST00000348990 TLR4O00206 839 aa17.1■□□□□ 0.33
APP-202ENST00000348990 GASTP01350 101 aa17.1■□□□□ 0.33
APP-202ENST00000348990 SPAM1P38567 509 aa17.1■□□□□ 0.33
APP-202ENST00000348990 CRISP1P54107 249 aa17.1■□□□□ 0.33
APP-202ENST00000348990 NAE1Q13564 534 aa17.1■□□□□ 0.33
APP-202ENST00000348990 GCNT6Q5T4J0 391 aa17.1■□□□□ 0.33
APP-202ENST00000348990 ATCAYQ86WG3 371 aa17.1■□□□□ 0.33
APP-202ENST00000348990 PHF21AQ96BD5 680 aa17.1■□□□□ 0.33
APP-202ENST00000348990 RAD9AQ99638 391 aa17.1■□□□□ 0.33
APP-202ENST00000348990 SLC35A5Q9BS91 424 aa17.1■□□□□ 0.33
APP-202ENST00000348990 TMEM39AQ9NV64 488 aa17.1■□□□□ 0.33
APP-202ENST00000348990 PADI2Q9Y2J8 665 aa17.1■□□□□ 0.33
APP-202ENST00000348990 SPEF1Q9Y4P9 236 aa17.1■□□□□ 0.33
APP-202ENST00000348990 AOAHP28039 575 aa17.1■□□□□ 0.33
APP-202ENST00000348990 CRYBA2P53672 197 aa17.1■□□□□ 0.33
APP-202ENST00000348990 LRRC70Q7Z2Q7 622 aa17.1■□□□□ 0.33
APP-202ENST00000348990 SZRD1Q7Z422 152 aa17.1■□□□□ 0.33
APP-202ENST00000348990 CELF5Q8N6W0 485 aaKnown RBP17.1■□□□□ 0.33
APP-202ENST00000348990 TCEANCQ8N8B7 351 aa17.1■□□□□ 0.33
APP-202ENST00000348990 KLHL6Q8WZ60 621 aa17.1■□□□□ 0.33
APP-202ENST00000348990 P2RY13Q9BPV8 354 aa17.1■□□□□ 0.33
APP-202ENST00000348990 HTATIP2Q9BUP3 242 aa17.1■□□□□ 0.33
APP-202ENST00000348990 SRRQ9GZT4 340 aa17.1■□□□□ 0.33
APP-202ENST00000348990 NLKQ9UBE8 527 aa17.1■□□□□ 0.33
APP-202ENST00000348990 SPIN1Q9Y657 262 aaPredicted RBP17.1■□□□□ 0.33
APP-202ENST00000348990 TRBC2A0A5B9 178 aa17.09■□□□□ 0.33
APP-202ENST00000348990 B4DXG7 233 aa17.09■□□□□ 0.33
APP-202ENST00000348990 TPST2O60704 377 aa17.09■□□□□ 0.33
APP-202ENST00000348990 C6orf47O95873 294 aa17.09■□□□□ 0.33
APP-202ENST00000348990 IGLV3-27P01718 113 aa17.09■□□□□ 0.33
APP-202ENST00000348990 SEMG1P04279 462 aa17.09■□□□□ 0.33
APP-202ENST00000348990 WEE1P30291 646 aa17.09■□□□□ 0.33
APP-202ENST00000348990 FRMPD2BQ6IN97 320 aa17.09■□□□□ 0.33
APP-202ENST00000348990 RFLNAQ6ZTI6 216 aa17.09■□□□□ 0.33
APP-202ENST00000348990 VRK3Q8IV63 474 aa17.09■□□□□ 0.33
APP-202ENST00000348990 TRMT61AQ96FX7 289 aaKnown RBP17.09■□□□□ 0.33
APP-202ENST00000348990 GPR62Q9BZJ7 368 aa17.09■□□□□ 0.33
APP-202ENST00000348990 TVP23BQ9NYZ1 205 aa17.09■□□□□ 0.33
APP-202ENST00000348990 COQ3Q9NZJ6 369 aa17.09■□□□□ 0.33
APP-202ENST00000348990 V9GYH0 126 aa17.09■□□□□ 0.33
APP-202ENST00000348990 MTMR11A4FU01 709 aa17.09■□□□□ 0.33
APP-202ENST00000348990 PRAMEF4O60810 478 aa17.09■□□□□ 0.33
APP-202ENST00000348990 NOS1APO75052 506 aaPredicted RBP17.09■□□□□ 0.33
APP-202ENST00000348990 OR56A5P0C7T3 313 aa17.09■□□□□ 0.33
APP-202ENST00000348990 UQCRC1P31930 480 aa17.09■□□□□ 0.33
APP-202ENST00000348990 NSG1P42857 185 aa17.09■□□□□ 0.33
APP-202ENST00000348990 PSPHP78330 225 aa17.09■□□□□ 0.33
APP-202ENST00000348990 LARS2Q15031 903 aaKnown RBP17.09■□□□□ 0.33
APP-202ENST00000348990 DDI2Q5TDH0 399 aa17.09■□□□□ 0.33
APP-202ENST00000348990 PRAMEF9Q5VWM5 478 aa17.09■□□□□ 0.33
APP-202ENST00000348990 ZNF57Q68EA5 555 aaPredicted RBP17.09■□□□□ 0.33
APP-202ENST00000348990 TMIGD1Q6UXZ0 262 aa17.09■□□□□ 0.33
APP-202ENST00000348990 AMIGO1Q86WK6 493 aa17.09■□□□□ 0.33
APP-202ENST00000348990 ATP6V1C2Q8NEY4 427 aa17.09■□□□□ 0.33
APP-202ENST00000348990 FAM83DQ9H4H8 585 aa17.09■□□□□ 0.33
APP-202ENST00000348990 SEC14L4Q9UDX3 406 aa17.09■□□□□ 0.33
APP-202ENST00000348990 SMAD6O43541 496 aaKnown RBP17.09■□□□□ 0.33
APP-202ENST00000348990 SCN2BO60939 215 aa17.09■□□□□ 0.33
APP-202ENST00000348990 PSIP1O75475 530 aaKnown RBP17.09■□□□□ 0.33
APP-202ENST00000348990 OR2B3O76000 313 aa17.09■□□□□ 0.33
APP-202ENST00000348990 RPS3P23396 243 aaKnown RBP eCLIP17.09■□□□□ 0.331e-7■■■□□ 16.2
APP-202ENST00000348990 GPC1P35052 558 aa17.09■□□□□ 0.33
APP-202ENST00000348990 PTPN5P54829 565 aa17.09■□□□□ 0.33
APP-202ENST00000348990 TATDN3Q17R31 274 aa17.09■□□□□ 0.33
APP-202ENST00000348990 FAM110CQ1W6H9 321 aa17.09■□□□□ 0.33
APP-202ENST00000348990 C5orf22Q49AR2 442 aa17.09■□□□□ 0.33
APP-202ENST00000348990 HECTD3Q5T447 861 aa17.09■□□□□ 0.33
APP-202ENST00000348990 PRR23CQ6ZRP0 262 aa17.09■□□□□ 0.33
APP-202ENST00000348990 PEX5LQ8IYB4 626 aa17.09■□□□□ 0.33
APP-202ENST00000348990 FAM46DQ8NEK8 389 aa17.09■□□□□ 0.33
APP-202ENST00000348990 DACT3Q96B18 629 aaPredicted RBP17.09■□□□□ 0.33
APP-202ENST00000348990 TTLL2Q9BWV7 592 aa17.09■□□□□ 0.33
APP-202ENST00000348990 NMNAT1Q9HAN9 279 aaPredicted RBP17.09■□□□□ 0.33
APP-202ENST00000348990 MAT2BQ9NZL9 334 aa17.09■□□□□ 0.33
APP-202ENST00000348990 CORO2BQ9UQ03 480 aa17.09■□□□□ 0.33
APP-202ENST00000348990 C5orf58C9J3I9 102 aa17.08■□□□□ 0.33
APP-202ENST00000348990 H3BNC9 293 aa17.08■□□□□ 0.33
APP-202ENST00000348990 RPL17P18621 184 aaKnown RBP17.08■□□□□ 0.33
APP-202ENST00000348990 ETV6P41212 452 aa17.08■□□□□ 0.33
APP-202ENST00000348990 GSTM5P46439 218 aa17.08■□□□□ 0.33
APP-202ENST00000348990 CDK6Q00534 326 aa17.08■□□□□ 0.33
APP-202ENST00000348990 DOC2BQ14184 412 aa17.08■□□□□ 0.33
APP-202ENST00000348990 ZXDCQ2QGD7 858 aaPredicted RBP17.08■□□□□ 0.33
APP-202ENST00000348990 LCN1P1Q5VSP4 162 aa17.08■□□□□ 0.33
APP-202ENST00000348990 SIGIRRQ6IA17 410 aa17.08■□□□□ 0.33
APP-202ENST00000348990 TSEN54Q7Z6J9 526 aaKnown RBP17.08■□□□□ 0.33
APP-202ENST00000348990 CCDC28AQ8IWP9 274 aa17.08■□□□□ 0.33
APP-202ENST00000348990 OR8H1Q8NGG4 311 aa17.08■□□□□ 0.33
APP-202ENST00000348990 PRELID1Q9Y255 219 aa17.08■□□□□ 0.33
APP-202ENST00000348990 C2orf78A6NCI8 922 aa17.08■□□□□ 0.32
APP-202ENST00000348990 SLC38A8A6NNN8 435 aa17.08■□□□□ 0.32
APP-202ENST00000348990 PDE9AO76083 593 aa17.08■□□□□ 0.32
APP-202ENST00000348990 HOXB9P17482 250 aaPredicted RBP17.08■□□□□ 0.32
APP-202ENST00000348990 PPIBP23284 216 aaKnown RBP17.08■□□□□ 0.32
APP-202ENST00000348990 FCHO2Q0JRZ9 810 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms