RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 OR4F21O95013 312 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 BCKDHAP12694 445 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 TUBG1P23258 451 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 GALNT1Q10472 559 aaPredicted RBP12.88□□□□□ -0.35
COL6A3-202ENST00000347401 PLA2G4EQ3MJ16 856 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 CCDC71LQ8N9Z2 235 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 BBS1Q8NFJ9 593 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 HSH2DQ96JZ2 352 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 SYT3Q9BQG1 590 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 HEPHQ9BQS7 1158 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 PCDHAC1Q9H158 963 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 TMEM185BQ9H7F4 350 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 NKX1-2Q9UD57 310 aaPredicted RBP12.88□□□□□ -0.35
COL6A3-202ENST00000347401 GNG8Q9UK08 70 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 SSX5O60225 188 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 AOC2O75106 756 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 TPT1P13693 172 aaKnown RBP12.88□□□□□ -0.35
COL6A3-202ENST00000347401 CD97P48960 835 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 ZNF763Q0D2J5 394 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 EXOC3L2Q2M3D2 409 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 SPIN3Q5JUX0 258 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 METAP1DQ6UB28 335 aaPredicted RBP12.88□□□□□ -0.35
COL6A3-202ENST00000347401 ZNF30P17039 623 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 MAXP61244 160 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 CYS1Q717R9 158 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 SKA3Q8IX90 412 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 NPAS3Q8IXF0 933 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 VWA5B2Q8N398 1253 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 PYCR2Q96C36 320 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 G6PC3Q9BUM1 346 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 MEAF6Q9HAF1 191 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 POU2F1P14859 743 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 CAPSQ13938 189 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 NOXA1Q86UR1 476 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 KAZALD1Q96I82 304 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 KIF25Q9UIL4 384 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 CHRFAM7AQ494W8 412 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 COQ10AQ96MF6 247 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 MRPS23Q9Y3D9 190 aaKnown RBP12.88□□□□□ -0.35
COL6A3-202ENST00000347401 TIMM13Q9Y5L4 95 aaPredicted RBP12.88□□□□□ -0.35
COL6A3-202ENST00000347401 NALCNQ8IZF0 1738 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 TRBC2A0A5B9 178 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 ADAM10O14672 748 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 OAS1P00973 400 aaKnown RBP12.88□□□□□ -0.35
COL6A3-202ENST00000347401 GTPBP8Q8N3Z3 284 aaPredicted RBP12.88□□□□□ -0.35
COL6A3-202ENST00000347401 OR10T2Q8NGX3 314 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 OR8K5Q8NH50 307 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 C7orf43Q8WVR3 580 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 BIRC7Q96CA5 298 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 ABCG5Q9H222 651 aa12.88□□□□□ -0.35
COL6A3-202ENST00000347401 NPIPA5E9PKD4 350 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 SHOXO15266 292 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 P2RX6O15547 441 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 HCKP08631 526 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 IL17AQ16552 155 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 LIPJQ5W064 366 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 KIAA0319LQ8IZA0 1049 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 FANK1Q8TC84 345 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 BORCS7Q96B45 105 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 ACTL8Q9H568 366 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 NPIPA1Q9UND3 350 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 PLIN4Q96Q06 1357 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 BMP2P12643 396 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 FAM117BQ6P1L5 589 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 ARHGAP11AQ6P4F7 1023 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 LCN9Q8WX39 176 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 PIP5K1AQ99755 562 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 DDX60Q8IY21 1712 aaKnown RBP12.87□□□□□ -0.35
COL6A3-202ENST00000347401 SCGB1D2O95969 90 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 AK1P00568 194 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 MYCLP1P12525 358 aaPredicted RBP12.87□□□□□ -0.35
COL6A3-202ENST00000347401 CKMT2P17540 419 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 CCDC58Q4VC31 144 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 IQCHQ86VS3 1027 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 LINC00116Q8NCU8 138 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 CHDHQ8NE62 594 aaPredicted RBP12.87□□□□□ -0.35
COL6A3-202ENST00000347401 OR14A2Q96R54 314 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 ZDHHC3Q9NYG2 299 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 KLHL21Q9UJP4 597 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 CHD3Q12873 2000 aaKnown RBP12.87□□□□□ -0.35
COL6A3-202ENST00000347401 UQCRC2P22695 453 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 TAS2R39P59534 338 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 CXCR4P61073 352 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 RPP30P78346 268 aaKnown RBP12.87□□□□□ -0.35
COL6A3-202ENST00000347401 ZNF440Q8IYI8 595 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 ZMIZ2Q8NF64 920 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 ANKRD33BA6NCL7 494 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 SEC14L2O76054 403 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 TSPAN15O95858 294 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 CAMK2DQ13557 499 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 MROQ9BYG7 248 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 UBE2Q2LH0YL09 131 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 MT-ND1P03886 318 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 BLOC1S1P78537 153 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 MOGSQ13724 837 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 FGL2Q14314 439 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 PDE12Q6L8Q7 609 aaKnown RBP12.87□□□□□ -0.35
COL6A3-202ENST00000347401 WFIKKN2Q8TEU8 576 aa12.87□□□□□ -0.35
COL6A3-202ENST00000347401 ZCCHC3Q9NUD5 404 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms