RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 BMFQ96LC9 184 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 CAMK1GQ96NX5 476 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 TBCDQ9BTW9 1192 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 MUC13Q9H3R2 512 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 UBE2ZQ9H832 354 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 EBF1Q9UH73 591 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 PNMA8BQ9ULN7 279 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 ERVK-11Q9UQG0 969 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 TDRD6O60522 2096 aaKnown RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 GNG14A0A1W2PPG7 69 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 FEZF1A0PJY2 475 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 GABRR3A8MPY1 467 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 H7BY64 318 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 TPST1O60507 370 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 PFDN1O60925 122 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 SCN2BO60939 215 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 ADAM11O75078 769 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 ERN1O75460 977 aaKnown RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 KLHL18O94889 574 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 EML2O95834 649 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 CAPNS1P04632 268 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 PIM1P11309 404 aaPredicted RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 IDSP22304 550 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 PSMA4P25789 261 aaKnown RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 AK4P27144 223 aaPredicted RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 HSD17B2P37059 387 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 FOXD4Q12950 439 aaPredicted RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 LAPTM5Q13571 262 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 LRIT3Q3SXY7 679 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 TMIGD1Q6UXZ0 262 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 GCNT7Q6ZNI0 430 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 COMMD6Q7Z4G1 85 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 TRIM69Q86WT6 500 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 TMEM126BQ8IUX1 230 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 FAM20CQ8IXL6 584 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 GALNT4Q8N4A0 578 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 JPH3Q8WXH2 748 aaPredicted RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 ASB12Q8WXK4 309 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 SMPDL3AQ92484 453 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 TSACCQ96A04 125 aaPredicted RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 PPWD1Q96BP3 646 aaKnown RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 BIRC7Q96CA5 298 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 METTL2AQ96IZ6 378 aaKnown RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 PRAP1Q96NZ9 151 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 CPPED1Q9BRF8 314 aaPredicted RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 PHF7Q9BWX1 381 aaPredicted RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 SORBS1Q9BX66 1292 aaKnown RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 RMND5AQ9H871 391 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 ARMC1Q9NVT9 282 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 C2orf42Q9NWW7 574 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 KLHL3Q9UH77 587 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 GDF2Q9UK05 429 aaPredicted RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 EXO1Q9UQ84 846 aaKnown RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 LAMA1P25391 3075 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 LRP4O75096 1905 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 FAM149AA5PLN7 773 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 SHISA8B8ZZ34 492 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 RFXANKO14593 260 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 FPGTO14772 594 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 SCAMP2O15127 329 aaKnown RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 TBX6O95947 436 aaPredicted RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 GGT1P19440 569 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 CD97P48960 835 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 C21orf58P58505 322 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 KIAA1024LP59773 190 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 ARPC4P59998 168 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 CYP4F2P78329 520 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 SRSF11Q05519 484 aaKnown RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 SLC14A1Q13336 389 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 KRT33BQ14525 404 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 NFATC4Q14934 902 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 INAQ16352 499 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 RPE65Q16518 533 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 UAP1L1Q3KQV9 507 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 FBXO43Q4G163 708 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 IRAK1BP1Q5VVH5 260 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 PROSER1Q86XN7 944 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 CLECL1Q8IZS7 167 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 ANKRD53Q8N9V6 530 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 ZNF548Q8NEK5 533 aaPredicted RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 ADCY4Q8NFM4 1077 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 OR2T12Q8NG77 320 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 CCL4L1Q8NHW4 92 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 EDARADDQ8WWZ3 215 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 TTC9Q92623 222 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 NELL1Q92832 810 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 OR2M4Q96R27 311 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 SH3GL1Q99961 368 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 EFHD1Q9BUP0 239 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 IRF2BPLQ9H1B7 796 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 KAT8Q9H7Z6 458 aaKnown RBP8.83□□□□□ -1
ATG4A-202ENST00000345734 TBC1D29Q9UFV1 150 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 RABL2BQ9UNT1 228 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 INVSQ9Y283 1065 aa8.83□□□□□ -1
ATG4A-202ENST00000345734 ARHGAP10A1A4S6 786 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 LRRC72A6NJI9 287 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 CPSF4O95639 269 aaKnown RBP8.82□□□□□ -1
ATG4A-202ENST00000345734 MT-ND1P03886 318 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 KLK1P06870 262 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 HOXC4P09017 264 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms