RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 FDXRP22570 491 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 MAGEA6P43360 314 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 S100A12P80511 92 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 EMX1Q04741 257 aaPredicted RBP17.45■□□□□ 0.38
SMC4-201ENST00000344722 FGFBP1Q14512 234 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 GTF2IRD2BQ6EKJ0 949 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 TAS1R3Q7RTX0 852 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 TMED4Q7Z7H5 227 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 GTF2IRD2Q86UP8 949 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 COX18Q8N8Q8 333 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 TM9SF2Q99805 663 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 SYN3O14994 580 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 CDC40O60508 579 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMC4-201ENST00000344722 ZNF14P17017 642 aaPredicted RBP17.45■□□□□ 0.38
SMC4-201ENST00000344722 CHMP24386 653 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 OR3A3P47888 321 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 OR3A2P47893 321 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 SNTB2Q13425 540 aaKnown RBP17.45■□□□□ 0.38
SMC4-201ENST00000344722 KLHL26Q53HC5 615 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 OR6C4Q8NGE1 309 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 SHKBP1Q8TBC3 707 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 ACDQ96AP0 544 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 FUBP3Q96I24 572 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMC4-201ENST00000344722 TRIB3Q96RU7 358 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 CFAP97Q9P2B7 532 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 SOWAHBA6NEL2 793 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 ELOA3DA6NLF2 546 aaPredicted RBP17.45■□□□□ 0.38
SMC4-201ENST00000344722 B4GAT1O43505 415 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 ITGAMP11215 1152 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 BCKDHAP12694 445 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 CMPK1P30085 196 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 ALDH3B2P48448 385 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 INHBCP55103 352 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 PRKCDQ05655 676 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 SNTA1Q13424 505 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 OCLNQ16625 522 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 ELOA3BQ3SY89 546 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 NOXRED1Q6NXP6 359 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 GPR142Q7Z601 462 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 ELOA3Q8NG57 546 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 GAL3ST1Q99999 423 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 NAA50Q9GZZ1 169 aaKnown RBP17.45■□□□□ 0.38
SMC4-201ENST00000344722 METTL8Q9H825 291 aaKnown RBP17.45■□□□□ 0.38
SMC4-201ENST00000344722 FBXO10Q9UK96 956 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 ZCWPW2A0A1B0GU75 182 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 ANKRD66B4E2M5 251 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 PVALBP20472 110 aaPredicted RBP17.44■□□□□ 0.38
SMC4-201ENST00000344722 IL32P24001 234 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 OR12D2P58182 307 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 PTCHD3Q3KNS1 767 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 LYSMD3Q7Z3D4 306 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 GALNT13Q8IUC8 556 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 TMEM151AQ8N4L1 468 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 TMEM102Q8N9M5 508 aaPredicted RBP17.44■□□□□ 0.38
SMC4-201ENST00000344722 MUL1Q969V5 352 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 IGSF5Q9NSI5 407 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 NLGN3Q9NZ94 848 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 ERVW-1Q9UQF0 538 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 SLC27A4Q6P1M0 643 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 FTMTQ8N4E7 242 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 TBC1D3BA6NDS4 549 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 CREBL2O60519 120 aaPredicted RBP17.44■□□□□ 0.38
SMC4-201ENST00000344722 RENP00797 406 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 CSN2P05814 226 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 FGF4P08620 206 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 AGTR1P30556 359 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 SERINC3Q13530 473 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 ATAD3CQ5T2N8 411 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 MSANTD1Q6ZTZ1 278 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 GPC2Q8N158 579 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 DTWD1Q8N5C7 304 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 PARP16Q8N5Y8 322 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 MRGPRX2Q96LB1 330 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 CACNG6Q9BXT2 260 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 IL37Q9NZH6 218 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 PCDHB11Q9Y5F2 797 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 GPX3P22352 226 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 CDKN2DP55273 166 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 CD180Q99467 661 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 B3GNT4Q9C0J1 378 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 COQ3Q9NZJ6 369 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 PCDHGA8Q9Y5G5 932 aa17.44■□□□□ 0.38
SMC4-201ENST00000344722 COL1A1P02452 1464 aaPredicted RBP17.44■□□□□ 0.38
SMC4-201ENST00000344722 CLDN24A6NM45 220 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 ZNF670-ZNF695F2Z2N8 137 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 OR1I1O60431 355 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 RGS9O75916 674 aaPredicted RBP17.43■□□□□ 0.38
SMC4-201ENST00000344722 RHCEP18577 417 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 GRK5P34947 590 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 OR1D2P34982 312 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 HSD17B2P37059 387 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 KCNC3Q14003 757 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 TRAM2Q15035 370 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 PTPN18Q99952 460 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 STRA6Q9BX79 667 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 TMEM248Q9NWD8 314 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 TEX51A0A1B0GUA7 166 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 CSNK2A2P19784 350 aaPredicted RBP17.43■□□□□ 0.38
SMC4-201ENST00000344722 TTLQ8NG68 377 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 OR13F1Q8NGS4 319 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms