RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ACOT9Q9Y305 439 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SPATA31C2B4DYI2 1134 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SULT1A3P0DMM9 295 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SULT1A4P0DMN0 295 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 FOLR2P14207 255 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SLC36A3Q495N2 470 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SLC35D2Q76EJ3 337 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SLC7A13Q8TCU3 470 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 KAT5Q92993 513 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 OR4K3Q96R72 315 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 OR8D2Q9GZM6 311 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CCM2LQ9NUG4 571 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PI4KBQ9UBF8 816 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF230Q9UIE0 474 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 NCANO14594 1321 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 OR6C6A6NF89 314 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 RFPL4AA6NLU0 287 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 RFPL4AL1F8VTS6 287 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SMIM22K7EJ46 135 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PCDH17O14917 1159 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 NPM3O75607 178 aaKnown RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SLC2A4P14672 509 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PGAM2P15259 253 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 GRK4P32298 578 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CERKLQ49MI3 558 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PAN2Q504Q3 1202 aaKnown RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CHST15Q7LFX5 561 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ADCK2Q7Z695 626 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PAQR7Q86WK9 346 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CLDN22Q8N7P3 220 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 DERL2Q9GZP9 239 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 TARBP1Q13395 1621 aaKnown RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 KDM4FA0A1W2PPD8 638 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TYROBPO43914 113 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 RAB11AP62491 216 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ASPRV1Q53RT3 343 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 BTNL3Q6UXE8 466 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ERMP1Q7Z2K6 904 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ADGRG5Q8IZF4 528 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 SLC38A6Q8IZM9 456 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PLPP5Q8NEB5 264 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MRGPRDQ8TDS7 321 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FGGYQ96C11 551 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 GPER1Q99527 375 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FAM118AQ9NWS6 357 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 DKKL1Q9UK85 242 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CEP250Q9BV73 2442 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM72A0PK05 275 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 YY2O15391 372 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 DCXO43602 365 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 NKX2-5P52952 324 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ERVFC1P60507 584 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 DSC1Q08554 894 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PAN3Q58A45 887 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CD276Q5ZPR3 534 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 SHC4Q6S5L8 630 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FA2HQ7L5A8 372 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ANKRD46Q86W74 232 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 AVL9Q8NBF6 648 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 SLC7A14Q8TBB6 771 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FAM122AQ96E09 287 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 DCLRE1CQ96SD1 692 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MED10Q9BTT4 135 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ARMCX1Q9P291 453 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 KPTNQ9Y664 436 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TBX1O43435 398 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PRAMEF2O60811 474 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CYP21A2P08686 494 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF30P17039 623 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 NCOA4Q13772 614 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 BANPQ8N9N5 519 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FAM120BQ96EK7 910 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ARL6Q9H0F7 186 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CRLF2Q9HC73 371 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PDP1Q9P0J1 537 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CHRNA9Q9UGM1 479 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 BIVM-ERCC5R4GMW8 1640 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ELOA3CA0A087WX78 387 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 F5H0A9 414 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CST1P01037 141 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 APOA2P02652 100 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FGBP02675 491 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MT-ND4LP03901 98 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ERVK-10P10266 1014 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 IDH2P48735 452 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 GLUD2P49448 558 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ITPK1Q13572 414 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PGBD3Q8N328 593 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CREBBPQ92793 2442 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM209Q96SK2 561 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MSTO1Q9BUK6 570 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TEX101Q9BY14 249 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 EIF5A2Q9GZV4 153 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 BTBD1Q9H0C5 482 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 BEX1Q9HBH7 125 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CHST12Q9NRB3 414 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MARCOQ9UEW3 520 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CAPN5O15484 640 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 HPGDSO60760 199 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 RPP40O75818 363 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms