RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 DDX60LQ5H9U9 1706 aaKnown RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 PAK4O96013 591 aaPredicted RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 KLKB1P03952 638 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 ALPPL2P10696 532 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 AGXTP21549 392 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 NCS1P62166 190 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 PTPRRQ15256 657 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 SLC36A3Q495N2 470 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 NIPAL1Q6NVV3 410 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 MFSD6LQ8IWD5 586 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 ZFP3Q96NJ6 502 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 F2RL3Q96RI0 385 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 MIR1-1HGQ9H1L0 117 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 XKR8Q9H6D3 395 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 MS4A12Q9NXJ0 267 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 GJD2Q9UKL4 321 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 MGAT4BQ9UQ53 548 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 UBE2QL1A1L167 161 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 BOLA2-SMG1P6H3BVE0 249 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 PLOD2O00469 737 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CAPN5O15484 640 aaPredicted RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 AKAP8O43823 692 aaKnown RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 ADAMTS4O75173 837 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 MTHFD2P13995 350 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 SMSP52788 366 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CDH11P55287 796 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 GPR68Q15743 365 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CDKL4Q5MAI5 379 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.92□□□□□ -1.3
VCAN-202ENST00000342785 TMCO2Q7Z6W1 182 aaPredicted RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 MARCH9Q86YJ5 346 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 FLCNQ8NFG4 579 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 ZNF675Q8TD23 568 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 TBX5Q99593 518 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 DCAF13Q9NV06 445 aaKnown RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 OLAHQ9NV23 265 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 KLHL33A6NCF5 533 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 TTC34A8MYJ7 566 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 NUAK1O60285 661 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 SEC13P55735 322 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 RPS26P62854 115 aaKnown RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 ARF5P84085 180 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 ZXDBP98169 803 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 SMU1Q2TAY7 513 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 TAF8Q7Z7C8 310 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CARM1Q86X55 608 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 COMMD2Q86X83 199 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 LINC00471Q8N535 108 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 OR8J1Q8NGP2 316 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CLSTN3Q9BQT9 956 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 NTMT1Q9BV86 223 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 TMEM138Q9NPI0 162 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 MSRAQ9UJ68 235 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 PMF1-BGLAPU3KQ54 211 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CCRL2O00421 344 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 NDUFS4O43181 175 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 RFPL2O75678 378 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CDRT1O95170 752 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 ATF6P18850 670 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 TACR1P25103 407 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 GRIA2P42262 883 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 PGFP49763 221 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CRISP1P54107 249 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 PSMD4P55036 377 aaKnown RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 GABARAPL2P60520 117 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 E2F2Q14209 437 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 NDUFA5Q16718 116 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 NDUFA9Q16795 377 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 UAP1L1Q3KQV9 507 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 KCT2Q8NC54 265 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 OR5P2Q8WZ92 322 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 PDLIM5Q96HC4 596 aaKnown RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 ZNF583Q96ND8 569 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 PIP5K1AQ99755 562 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 NPLQ9BXD5 320 aaPredicted RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 KLF16Q9BXK1 252 aaPredicted RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 ACPTQ9BZG2 426 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 ANKHQ9HCJ1 492 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 TMA7Q9Y2S6 64 aaKnown RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 HSPE1-MOB4S4R3N1 261 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 ZNF701M0R085 212 aaPredicted RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 CLDN4O14493 209 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 HLA-DPB1P04440 258 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 POLR2IP36954 125 aaKnown RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 ST3GAL3Q11203 375 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 METTL2BQ6P1Q9 378 aaKnown RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 TMEM207Q6UWW9 146 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 MSANTD1Q6ZTZ1 278 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 PIWIL3Q7Z3Z3 882 aaKnown RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 COMMD6Q7Z4G1 85 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 PELI3Q8N2H9 469 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SLC15A4Q8N697 577 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 PXYLP1Q8TE99 480 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 POF1BQ8WVV4 589 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SLC22A18Q96BI1 424 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 ASPNQ9BXN1 380 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 STOX2Q9P2F5 926 aaPredicted RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 RWDD3Q9Y3V2 267 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 PRSS21Q9Y6M0 314 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 ANKRD36CQ5JPF3 1778 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms