RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TSLPQ969D9 159 aa10.13□□□□□ -0.79
ATXN3-201ENST00000340660 BTBD9Q96Q07 612 aa10.13□□□□□ -0.79
ATXN3-201ENST00000340660 DHX35Q9H5Z1 703 aaKnown RBP10.13□□□□□ -0.79
ATXN3-201ENST00000340660 METTL17Q9H7H0 456 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-201ENST00000340660 LUC7LQ9NQ29 371 aaKnown RBP10.13□□□□□ -0.79
ATXN3-201ENST00000340660 ETNK2Q9NVF9 386 aa10.13□□□□□ -0.79
ATXN3-201ENST00000340660 INTS7Q9NVH2 962 aaKnown RBP10.13□□□□□ -0.79
ATXN3-201ENST00000340660 TUBA8Q9NY65 449 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-201ENST00000340660 ERVK-11Q9UQG0 969 aa10.13□□□□□ -0.79
ATXN3-201ENST00000340660 TTLL3Q9Y4R7 772 aa10.13□□□□□ -0.79
ATXN3-201ENST00000340660 SPO11Q9Y5K1 396 aa10.13□□□□□ -0.79
ATXN3-201ENST00000340660 RFPL3SP0C7P2 107 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 ERVK-10P10266 1014 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 PCK1P35558 622 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 CD79BP40259 229 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 POU4F1Q01851 419 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 HKDC1Q2TB90 917 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 NAA35Q5VZE5 725 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 RNF44Q7L0R7 432 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 TAX1BP1Q86VP1 789 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 C10orf105Q8TEF2 133 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 ZNF418Q8TF45 676 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-201ENST00000340660 SMAP2Q8WU79 429 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-201ENST00000340660 PROX1Q92786 737 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 TRIB3Q96RU7 358 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 TIMP4Q99727 224 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 SOX7Q9BT81 388 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 PRDM14Q9GZV8 571 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 PDCL3Q9H2J4 239 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 MMP27Q9H306 513 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 PIGMQ9H3S5 423 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.12□□□□□ -0.79
ATXN3-201ENST00000340660 SLAMF8Q9P0V8 285 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 TMEFF2Q9UIK5 374 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-201ENST00000340660 CORINQ9Y5Q5 1042 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 FREM3P0C091 2139 aa10.12□□□□□ -0.79
ATXN3-201ENST00000340660 FRG2CA6NGY1 282 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 ZNF354AO60765 605 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-201ENST00000340660 CD8AP01732 235 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 HKR1P10072 659 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 COL6A2P12110 1019 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 CNR1P21554 472 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 PKLRP30613 574 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 TRPC1P48995 793 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 PRLHRP49683 370 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 DIO3P55073 304 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 NOMO3P69849 1222 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 RHAGQ02094 409 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 PTK6Q13882 451 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 ABRAXAS2Q15018 415 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 NSDHLQ15738 373 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 PGGHGQ32M88 737 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 CCDC40Q4G0X9 1142 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 RNF187Q5TA31 235 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-201ENST00000340660 TAF3Q5VWG9 929 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 ADAM5Q6NVV9 412 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 LRRC8BQ6P9F7 803 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 DEF8Q6ZN54 512 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 SNX31Q8N9S9 440 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 MSANTD4Q8NCY6 345 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 DTX3LQ8TDB6 740 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 FAM111AQ96PZ2 611 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 ADGRE3Q9BY15 652 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 DEFB126Q9BYW3 111 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 ZNF703Q9H7S9 590 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-201ENST00000340660 FN3KRPQ9HA64 309 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 ZNHIT6Q9NWK9 470 aaKnown RBP10.11□□□□□ -0.79
ATXN3-201ENST00000340660 SMOXQ9NWM0 555 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 PACSIN3Q9UKS6 424 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 PCDHB10Q9UN67 800 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 ASF1AQ9Y294 204 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 NCKAP5O14513 1909 aa10.11□□□□□ -0.79
ATXN3-201ENST00000340660 C15orf38-AP3S2A0A0A6YYH1 394 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 A8MVJ9 347 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 TARM1B6A8C7 271 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 H0YGG7 62 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 OR6B1O95007 311 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 HLA-DQB2P05538 268 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 PTPN6P29350 595 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 SLCO1A2P46721 670 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 SSR4P51571 173 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 OR4D2P58180 307 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 ARF3P61204 181 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-201ENST00000340660 NRF1Q16656 503 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 ZNF750Q32MQ0 723 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 ZNF474Q6S9Z5 364 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-201ENST00000340660 POLNQ7Z5Q5 900 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 TBC1D21Q8IYX1 336 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 RAB3IL1Q8TBN0 382 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 NEUROG1Q92886 237 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 FBXW5Q969U6 566 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 ZUFSPQ96AP4 578 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 INTS12Q96CB8 462 aaKnown RBP10.1□□□□□ -0.79
ATXN3-201ENST00000340660 TRAF4Q9BUZ4 470 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-201ENST00000340660 KRTAP4-7Q9BYR0 210 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 DRC3Q9H069 523 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 CALHM2Q9HA72 323 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 HPF1Q9NWY4 346 aa10.1□□□□□ -0.79
ATXN3-201ENST00000340660 CWC15Q9P013 229 aaKnown RBP10.1□□□□□ -0.79
ATXN3-201ENST00000340660 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms