RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 PMP22Q01453 160 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 ILF2Q12905 390 aaKnown RBP15.98■□□□□ 0.15
BRCC3-202ENST00000340647 TUBA3CQ13748 450 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 BMPR2Q13873 1038 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 ABHD17BQ5VST6 288 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 TUBA3EQ6PEY2 450 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 TCAIMQ8N3R3 496 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 TBC1D19Q8N5T2 526 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 NXNL1Q96CM4 212 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 C16orf45Q96MC5 204 aaPredicted RBP15.98■□□□□ 0.15
BRCC3-202ENST00000340647 PTCHD1Q96NR3 888 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 GPR78Q96P69 363 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 RHBGQ9H310 441 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 EHD1Q9H4M9 534 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 CLK4Q9HAZ1 481 aaKnown RBP15.98■□□□□ 0.15
BRCC3-202ENST00000340647 KCNK13Q9HB14 408 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 PRDM7Q9NQW5 492 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 WWOXQ9NZC7 414 aa15.98■□□□□ 0.15
BRCC3-202ENST00000340647 ZNF223Q9UK11 482 aaPredicted RBP15.98■□□□□ 0.15
BRCC3-202ENST00000340647 A1L4Q6 167 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 UBXN8O00124 270 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 PRMT3O60678 531 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 PRAMEF2O60811 474 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 CLEC3AO75596 197 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 TFEBP19484 476 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 PPP2R1BP30154 601 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 CASP2P42575 452 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 GPR143P51810 404 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 EXT1Q16394 746 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 SCUBE1Q8IWY4 988 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 KCTD4Q8WVF5 259 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 NR4A3Q92570 626 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 GAL3ST3Q96A11 431 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 LPAR4Q99677 370 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 CD244Q9BZW8 370 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 ANKRD10Q9NXR5 420 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 NINJ2Q9NZG7 142 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 CD274Q9NZQ7 290 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 TXNDC16Q9P2K2 825 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 SLC5A6Q9Y289 635 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 CREBBPQ92793 2442 aa15.97■□□□□ 0.15
BRCC3-202ENST00000340647 PCNX1Q96RV3 2341 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 CYR61O00622 381 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 ERI3O43414 337 aaKnown RBP15.96■□□□□ 0.15
BRCC3-202ENST00000340647 H2AFYO75367 372 aaKnown RBP15.96■□□□□ 0.15
BRCC3-202ENST00000340647 NEURL1O76050 574 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 C2P06681 752 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 RNH1P13489 461 aaKnown RBP15.96■□□□□ 0.15
BRCC3-202ENST00000340647 COL8A1P27658 744 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 STX2P32856 288 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 KCNK10P57789 538 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 PCDH1Q08174 1060 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 SPINK14Q6IE38 97 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 NIPAL1Q6NVV3 410 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 ABHD17CQ6PCB6 329 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 FAM180AQ6UWF9 173 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 ZNF793Q6ZN11 406 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 RELL1Q8IUW5 271 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 ARMC10Q8N2F6 343 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 MMGT1Q8N4V1 131 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 BCORP1Q8N888 145 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 APCDD1LQ8NCL9 501 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 UBTD2Q8WUN7 234 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 EXT2Q93063 718 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 SCMH1Q96GD3 660 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 ZNF354BQ96LW1 612 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 MAGEB10Q96LZ2 347 aaPredicted RBP15.96■□□□□ 0.15
BRCC3-202ENST00000340647 CSF3RQ99062 836 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 FUT8Q9BYC5 575 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 PITHD1Q9GZP4 211 aaPredicted RBP15.96■□□□□ 0.15
BRCC3-202ENST00000340647 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.96■□□□□ 0.15
BRCC3-202ENST00000340647 PRDM9Q9NQV7 894 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 OLAHQ9NV23 265 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 KCMF1Q9P0J7 381 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 RNF112Q9ULX5 631 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 OSGIN2Q9Y236 505 aa15.96■□□□□ 0.15
BRCC3-202ENST00000340647 NCOA6Q14686 2063 aaPredicted RBP15.95■□□□□ 0.14
BRCC3-202ENST00000340647 URADA6NGE7 173 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 LRRC14BA6NHZ5 514 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 SAGE2PA6NJ88 616 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 A8MUA0 341 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 KERAO60938 352 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 URI1O94763 535 aaPredicted RBP15.95■□□□□ 0.14
BRCC3-202ENST00000340647 DDAH2O95865 285 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 ALDOAP04075 364 aaKnown RBP15.95■□□□□ 0.14
BRCC3-202ENST00000340647 STSP08842 583 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 LTA4HP09960 611 aaKnown RBP15.95■□□□□ 0.14
BRCC3-202ENST00000340647 JAK1P23458 1154 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 AP2B1P63010 937 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 ACTN3Q08043 901 aaPredicted RBP15.95■□□□□ 0.14
BRCC3-202ENST00000340647 CHIT1Q13231 466 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 NAB1Q13506 487 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 SLMAPQ14BN4 828 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 TBCCQ15814 346 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 INAQ16352 499 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 PDK4Q16654 411 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 MEP1AQ16819 746 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 XKR6Q5GH73 641 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 MROH9Q5TGP6 573 aa15.95■□□□□ 0.14
BRCC3-202ENST00000340647 C8orf74Q6P047 294 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms