RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 STON1Q9Y6Q2 735 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 WDFY4Q6ZS81 3184 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 ALPK3Q96L96 1907 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 WDFY3Q8IZQ1 3526 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 MUC3AQ02505 3323 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 A0A1W2PRB8 838 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 H0YAE9 185 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 LCKP06239 509 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 BCHEP06276 602 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 SPTBP11277 2137 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 PRPH2P23942 346 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 TPP2P29144 1249 aaPredicted RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 TRPC1P48995 793 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 MVDP53602 400 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 LSM11P83369 360 aaKnown RBP eCLIP8.46□□□□□ -1.06
SNCA-201ENST00000336904 DLX2Q07687 328 aaPredicted RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 ELP6Q0PNE2 266 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 RUNX3Q13761 415 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 SCARB2Q14108 478 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 IRF4Q15306 451 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 DUSP7Q16829 419 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 CDKL4Q5MAI5 379 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 ZNF691Q5VV52 312 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 TTC23Q5W5X9 447 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 PNCKQ6P2M8 343 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 ERI1Q8IV48 349 aaKnown RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 RASGRP3Q8IV61 690 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 SFTPA2Q8IWL1 248 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.46□□□□□ -1.06
SNCA-201ENST00000336904 LRRC56Q8IYG6 542 aaPredicted RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 SYNPOQ8N3V7 929 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 SLC5A8Q8N695 610 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 ZNF540Q8NDQ6 660 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 FLCNQ8NFG4 579 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 OR2L2Q8NH16 312 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 PROX1Q92786 737 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 OTUB2Q96DC9 234 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 MYADMQ96S97 322 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 FUNDC2Q9BWH2 189 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 PRR14Q9BWN1 585 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 RSPO3Q9BXY4 272 aaPredicted RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 ALOXE3Q9BYJ1 711 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 ASPSCR1Q9BZE9 553 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 KLHL31Q9H511 634 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 PCDH17O14917 1159 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 TMPRSS11DO60235 418 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 SOX14O95416 240 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 FGF19O95750 216 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 MT-ND2P03891 347 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 C21orf33P30042 268 aaPredicted RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 GP2P55259 537 aaKnown RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 VBP1P61758 197 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 KRT33BQ14525 404 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 SYT16Q17RD7 645 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 SMU1Q2TAY7 513 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 SPIN4Q56A73 249 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 SHQ1Q6PI26 577 aaKnown RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 CBLL1Q75N03 491 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 FAM129CQ86XR2 697 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 YAF2Q8IY57 180 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 VPS37AQ8NEZ2 397 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 CCL4L1Q8NHW4 92 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 HHIPQ96QV1 700 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 NODALQ96S42 347 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 ZCCHC2Q9C0B9 1178 aaKnown RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 QRSL1Q9H0R6 528 aaKnown RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 RAD18Q9NS91 495 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 ZFR2Q9UPR6 939 aaKnown RBP8.46□□□□□ -1.06
SNCA-201ENST00000336904 SLC27A6Q9Y2P4 619 aa8.46□□□□□ -1.06
SNCA-201ENST00000336904 COL4A3Q01955 1670 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 DMDP11532 3685 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 C4orf51C9J302 202 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 PCDHGA12O60330 932 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 ABCB7O75027 752 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 FAM20BO75063 409 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 ERAL1O75616 437 aaKnown RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 EML2O95834 649 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 CD72P21854 359 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 AK4P27144 223 aaPredicted RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 KRT20P35900 424 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 MAPK12P53778 367 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 RAD23AP54725 363 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 RAB8AP61006 207 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 RPP38P78345 283 aaKnown RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 EMX1Q04741 257 aaPredicted RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 PDGFRLQ15198 375 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 MLF2Q15773 248 aaPredicted RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 CST6Q15828 149 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 HIST2H2ACQ16777 129 aaPredicted RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 EXOC3L2Q2M3D2 409 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 SOWAHCQ53LP3 525 aaPredicted RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 AGBL4Q5VU57 503 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 HIST2H2AA3Q6FI13 130 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 METTL2BQ6P1Q9 378 aaKnown RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 C17orf64Q86WR6 236 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 SVOPLQ8N434 492 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 HERVK_113Q902F9 699 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 PPP1R16AQ96I34 528 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 C7orf34Q96L11 122 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 INSM2Q96T92 566 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms