RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PDZK1Q5T2W1 519 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 NLRP8Q86W28 1048 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 VPS37AQ8NEZ2 397 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 NFKBIDQ8NI38 313 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 WDFY2Q96P53 400 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 RERGLQ9H628 205 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 SH3BP4Q9P0V3 963 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 ABT1Q9ULW3 272 aaKnown RBP13.86□□□□□ -0.19
SNX20-202ENST00000330943 RUVBL1Q9Y265 456 aaKnown RBP13.86□□□□□ -0.19
SNX20-202ENST00000330943 HCN4Q9Y3Q4 1203 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 NPIPB8E9PQR5 432 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 ZNF670-ZNF695F2Z2N8 137 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 TMCC2O75069 709 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 CSO75390 466 aaKnown RBP13.85□□□□□ -0.19
SNX20-202ENST00000330943 IGHA2P01877 340 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 CSF3P09919 207 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 JUPP14923 745 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 PCSK2P16519 638 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 HNF1BP35680 557 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 FEN1P39748 380 aaKnown RBP13.85□□□□□ -0.19
SNX20-202ENST00000330943 CRYBB2P43320 205 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 VEPH1Q14D04 833 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 LARS2Q15031 903 aaKnown RBP13.85□□□□□ -0.19
SNX20-202ENST00000330943 DUSP7Q16829 419 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 LYPLAL1Q5VWZ2 237 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 KLHL17Q6TDP4 642 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 PAMR1Q6UXH9 720 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 ANKS3Q6ZW76 656 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 RNF121Q9H920 327 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 TOR4AQ9NXH8 423 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 DNAJC27Q9NZQ0 273 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 FTSJ1Q9UET6 329 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 VWA8A3KMH1 1905 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 ALPK3Q96L96 1907 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 ZAR1LA6NP61 321 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 FAM227AF5H4B4 570 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 CDRT1O95170 752 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 GADD45GO95257 159 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 CBSLP0DN79 551 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 CD22P20273 847 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 SSTR4P31391 388 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 CBSP35520 551 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 PRIM2P49643 509 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 DSC1Q08554 894 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 SPHARQ15513 63 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 RDH10Q8IZV5 341 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 DIRAS2Q96HU8 199 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 NECTIN4Q96NY8 510 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 MAPKAP1Q9BPZ7 522 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 SLC12A9Q9BXP2 914 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 ACER3Q9NUN7 267 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 HCSTQ9UBK5 93 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 SEC14L4Q9UDX3 406 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 CHD7Q9P2D1 2997 aa13.85□□□□□ -0.19
SNX20-202ENST00000330943 A0A0X1KG70 313 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 FABP12A6NFH5 140 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 MPZL2O60487 215 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 VNN2O95498 520 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 CCND3P30281 292 aaPredicted RBP13.84□□□□□ -0.19
SNX20-202ENST00000330943 SPAM1P38567 509 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 MLLT3P42568 568 aaPredicted RBP13.84□□□□□ -0.19
SNX20-202ENST00000330943 NSG1P42857 185 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 CRISP1P54107 249 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 RHAGQ02094 409 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 SCARB2Q14108 478 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 EFR3AQ14156 821 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 GLYR1Q49A26 553 aaPredicted RBP13.84□□□□□ -0.19
SNX20-202ENST00000330943 XKR6Q5GH73 641 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.84□□□□□ -0.19
SNX20-202ENST00000330943 CLLU1OSQ5K130 101 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 CHST9Q7L1S5 443 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 TSPAN33Q86UF1 283 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 TRIM69Q86WT6 500 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 VRK3Q8IV63 474 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 SIX5Q8N196 739 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 TP53I13Q8NBR0 393 aaPredicted RBP13.84□□□□□ -0.19
SNX20-202ENST00000330943 HCAR2Q8TDS4 363 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 BHMTQ93088 406 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 P2RY13Q9BPV8 354 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 GPATCH2Q9NW75 528 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 BTNL2Q9UIR0 455 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 STUB1Q9UNE7 303 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 LSM2Q9Y333 95 aaKnown RBP13.84□□□□□ -0.19
SNX20-202ENST00000330943 Q9Y3F1 56 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 SMIM30A4D0T7 59 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 SLC35F4A4IF30 521 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 SLC38A8A6NNN8 435 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 GASTP01350 101 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 CHRM5P08912 532 aaPredicted RBP13.84□□□□□ -0.19
SNX20-202ENST00000330943 ANXA4P09525 319 aaPredicted RBP13.84□□□□□ -0.19
SNX20-202ENST00000330943 CCNYL3P0C7X3 344 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 CBLP22681 906 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 CSTF2P33240 577 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNX20-202ENST00000330943 PRKCZQ05513 592 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 HNRNPA0Q13151 305 aaKnown RBP13.84□□□□□ -0.19
SNX20-202ENST00000330943 QPRTQ15274 297 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 LEXMQ3ZCV2 418 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 CDKL4Q5MAI5 379 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 SLC35F1Q5T1Q4 408 aa13.84□□□□□ -0.19
SNX20-202ENST00000330943 LIPKQ5VXJ0 399 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms