RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 KRT87PA6NCN2 255 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 URADA6NGE7 173 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 FAM159BA6NKW6 160 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 RAD51CO43502 376 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 BANF1O75531 89 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 BMP10O95393 424 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 SYF2O95926 243 aaKnown RBP5.99□□□□□ -1.45
SMG1-201ENST00000330588 SLC35G6P0C7Q6 338 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 NPPBP16860 134 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 CXCR2P25025 360 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 HPDP32754 393 aaPredicted RBP5.99□□□□□ -1.45
SMG1-201ENST00000330588 STX2P32856 288 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 GGT5P36269 586 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 TSFMP43897 325 aaKnown RBP5.99□□□□□ -1.45
SMG1-201ENST00000330588 AGTR2P50052 363 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 CCR8P51685 355 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 MEF2AQ02078 507 aaPredicted RBP5.99□□□□□ -1.45
SMG1-201ENST00000330588 NAE1Q13564 534 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 HERC3Q15034 1050 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 CRB2Q5IJ48 1285 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 RPUSD3Q6P087 351 aaKnown RBP5.99□□□□□ -1.45
SMG1-201ENST00000330588 NDUFAF7Q7L592 441 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 VN1R4Q7Z5H5 301 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 ZBED8Q8IZ13 594 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 IQCKQ8N0W5 287 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 AFAP1L2Q8N4X5 818 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 CELF2-AS1Q8N7Q2 184 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 RBMXL3Q8N7X1 1067 aaKnown RBP5.99□□□□□ -1.45
SMG1-201ENST00000330588 MFSD9Q8NBP5 474 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 PPFIBP2Q8ND30 876 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 TRPV3Q8NET8 790 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 TTLQ8NG68 377 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 DNAJB8Q8NHS0 232 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 OLFM1Q99784 485 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 WDR77Q9BQA1 342 aaPredicted RBP5.99□□□□□ -1.45
SMG1-201ENST00000330588 TUBB6Q9BUF5 446 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 SLC29A3Q9BZD2 475 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 ZNF700Q9H0M5 742 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 EHD1Q9H4M9 534 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 PPANQ9NQ55 473 aaKnown RBP5.99□□□□□ -1.45
SMG1-201ENST00000330588 C3orf18Q9UK00 162 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMG1-201ENST00000330588 ANKRD12Q6UB98 2062 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 HEATR5BQ9P2D3 2071 aa5.99□□□□□ -1.45
SMG1-201ENST00000330588 MDC1Q14676 2089 aaKnown RBP5.98□□□□□ -1.45
SMG1-201ENST00000330588 IGHV1-45A0A0A0MS14 117 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 IDSB3KWA1 339 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 H7BY64 318 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 KIF2AO00139 706 aaPredicted RBP5.98□□□□□ -1.45
SMG1-201ENST00000330588 RGS13O14921 159 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 P2RX6O15547 441 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 NRP2O60462 931 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 TSPAN15O95858 294 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 C1QAP02745 245 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 SERPINA7P05543 415 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 COX6A1P12074 109 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 CDH1P12830 882 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 NR1D1P20393 614 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 SPRP35270 261 aaPredicted RBP5.98□□□□□ -1.45
SMG1-201ENST00000330588 GP5P40197 560 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 OR1D4P47884 311 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 EMP2P54851 167 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 ATP6V0D1P61421 351 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 REEP5Q00765 189 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 GUCY2DQ02846 1103 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 RGS1Q08116 209 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 CHAF1BQ13112 559 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 MFAP5Q13361 173 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 E2F2Q14209 437 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 FASTKD3Q14CZ7 662 aaKnown RBP5.98□□□□□ -1.45
SMG1-201ENST00000330588 MLANAQ16655 118 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 WHAMMP3Q1A5X7 153 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 GRTP1Q5TC63 336 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 AGAP7PQ5VUJ5 663 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 METTL2BQ6P1Q9 378 aaKnown RBP5.98□□□□□ -1.45
SMG1-201ENST00000330588 ADCK2Q7Z695 626 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 ASPGQ86U10 573 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 ANKRD13BQ86YJ7 626 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 C1QL4Q86Z23 238 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 ZC3H7AQ8IWR0 971 aaKnown RBP5.98□□□□□ -1.45
SMG1-201ENST00000330588 KBTBD2Q8IY47 623 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 FAM26EQ8N5C1 309 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 Q8NA96 180 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 PLPP5Q8NEB5 264 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 C7orf57Q8NEG2 295 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 CPT1CQ8TCG5 803 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 ADAMTS18Q8TE60 1221 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.98□□□□□ -1.45
SMG1-201ENST00000330588 RNF31Q96EP0 1072 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 MMABQ96EY8 250 aaPredicted RBP5.98□□□□□ -1.45
SMG1-201ENST00000330588 UBXN10Q96LJ8 280 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 PRAP1Q96NZ9 151 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 AGAP4Q96P64 663 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 RBBP8Q99708 897 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 AIF1LQ9BQI0 150 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 FUT8Q9BYC5 575 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 EPS8L2Q9H6S3 715 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 CNOT10Q9H9A5 744 aaKnown RBP5.98□□□□□ -1.45
SMG1-201ENST00000330588 ANKHQ9HCJ1 492 aa5.98□□□□□ -1.45
SMG1-201ENST00000330588 TXNDC16Q9P2K2 825 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms