RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 IL23RQ5VWK5 629 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 PAOXQ6QHF9 649 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 CYP20A1Q6UW02 462 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 SCIMPQ6UWF3 145 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 TIPARPQ7Z3E1 657 aaKnown RBP15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 TRIM73Q86UV7 250 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 OOSP2Q86WS3 158 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 DTX1Q86Y01 620 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 FUNDC1Q8IVP5 155 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 ULK2Q8IYT8 1036 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 DEFB107AQ8IZN7 70 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 LINC01555Q8NAE3 123 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 ABHD11Q8NFV4 315 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 RCN3Q96D15 328 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 FCRL1Q96LA6 429 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 ACPTQ9BZG2 426 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 TWSG1Q9GZX9 223 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 CPNE5Q9HCH3 593 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 FBXO8Q9NRD0 319 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 LEF1Q9UJU2 399 aaPredicted RBP15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 ACSL6Q9UKU0 697 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 POMT2Q9UKY4 750 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 RUVBL1Q9Y265 456 aaKnown RBP15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 PCDHGA3Q9Y5H0 932 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 SLC9B1P1A6NJY1 282 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 TOX3O15405 576 aaPredicted RBP15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 CFLARO15519 480 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 RRP8O43159 456 aaKnown RBP15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 TIAF1O95411 115 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 IL6P05231 212 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 SHMT2P34897 504 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 DIO3P55073 304 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 TBL3Q12788 808 aaKnown RBP15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 KIAA0040Q15053 153 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 DPY19L1Q2PZI1 675 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 RFTN2Q52LD8 501 aaPredicted RBP15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 SPIN4Q56A73 249 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 BNC2Q6ZN30 1099 aaPredicted RBP15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 GK5Q6ZS86 529 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 FBXW8Q8N3Y1 598 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 TTLQ8NG68 377 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 OR7G3Q8NG95 312 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 SLC22A18Q96BI1 424 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 SPDL1Q96EA4 605 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 OR6C1Q96RD1 312 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 AIF1LQ9BQI0 150 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 WDR41Q9HAD4 459 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 OR6C2Q9NZP2 312 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 PRDM4Q9UKN5 801 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 PCDHB11Q9Y5F2 797 aa15.68■□□□□ 0.1
PDLIM1-201ENST00000329399 A0A088AWK7 358 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 C15orf38-AP3S2A0A0A6YYH1 394 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 GSAPA4D1B5 854 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 CCDC154A6NI56 674 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 MRASO14807 208 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 HCRTR1O43613 425 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 PRAMEF4O60810 478 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 EEDO75530 441 aaKnown RBP15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 FKBP9O95302 570 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 ST6GAL1P15907 406 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 PKLRP30613 574 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 MTTPP55157 894 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 C21orf58P58505 322 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 RPL38P63173 70 aaKnown RBP15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 ZIC1Q15915 447 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 SGO1Q5FBB7 561 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 DCAF12Q5T6F0 453 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 PRAMEF9Q5VWM5 478 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 REP15Q6BDI9 236 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 KLHL35Q6PF15 583 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 MSANTD1Q6ZTZ1 278 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 ARPINQ7Z6K5 226 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 TMPRSS11BQ86T26 416 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 VASH2Q86V25 355 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 TBC1D19Q8N5T2 526 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 PPFIBP2Q8ND30 876 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 PROKR1Q8TCW9 393 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 OR2A14Q96R47 310 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 DDA1Q9BW61 102 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 WDR70Q9NW82 654 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 ACTR10Q9NZ32 417 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 CROTQ9UKG9 612 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 PILRAQ9UKJ1 303 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 AP3M1Q9Y2T2 418 aa15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 WBP11Q9Y2W2 641 aaKnown RBP15.67■□□□□ 0.1
PDLIM1-201ENST00000329399 TLCD2A6NGC4 264 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 POLR1CO15160 346 aaPredicted RBP15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 CHRM5P08912 532 aaPredicted RBP15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 G6PDP11413 515 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 CD22P20273 847 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 PTX3P26022 381 aaPredicted RBP15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 ASMTP46597 345 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 CCR8P51685 355 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 CLDN8P56748 225 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 GPR19Q15760 415 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 PRAMEF17Q5VTA0 474 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 LRRC69Q6ZNQ3 347 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 DPP10Q8N608 796 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 OR4K1Q8NGD4 311 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 JADE3Q92613 823 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms