RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TCEAL4Q96EI5 215 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 MKLN1Q9UL63 735 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 SBF2Q86WG5 1849 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 COL11A2P13942 1736 aaPredicted RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 WNT9AO14904 365 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 PAK4O96013 591 aaPredicted RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 SLC2A2P11168 524 aaPredicted RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 ZNF8P17098 575 aaPredicted RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 CASP3P42574 277 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 HNRNPFP52597 415 aaKnown RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 ZNF140P52738 457 aaPredicted RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 GCNT6Q5T4J0 391 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 Q6ZSR9 355 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 NRARPQ7Z6K4 114 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 METTL4Q8N3J2 472 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 MACROD1Q9BQ69 325 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 NECTIN3Q9NQS3 549 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 EIF3KQ9UBQ5 218 aaKnown RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 N6AMT1Q9Y5N5 214 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 H7BY64 318 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 BCHEP06276 602 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 MMP2P08253 660 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 PRPS1L1P21108 318 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 PAICSP22234 425 aaKnown RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 ACRV1P26436 265 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 CA5AP35218 305 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 HK3P52790 923 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 TUBA1BP68363 451 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 MVKQ03426 396 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 TMEM115Q12893 351 aaPredicted RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 AQP6Q13520 282 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 DOC2AQ14183 400 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 RUNDC3AQ59EK9 446 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 TUBA1AQ71U36 451 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 SLC37A3Q8NCC5 494 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 GLB1L3Q8NCI6 653 aaPredicted RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 GALNT6Q8NCL4 622 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 SLAIN1Q8ND83 568 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 EFHD2Q96C19 240 aaPredicted RBP14.7□□□□□ -0.06
VARS2-201ENST00000321897 PRAP1Q96NZ9 151 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 TRAV6A0A075B6T7 132 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 CPSF4LA6NMK7 179 aaKnown RBP14.69□□□□□ -0.06
VARS2-201ENST00000321897 CHRNB1P11230 501 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 FPR1P21462 350 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 CTGFP29279 349 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 RORCP51449 518 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 AGAP7PQ5VUJ5 663 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 OR6C4Q8NGE1 309 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 RHOXF1Q8NHV9 184 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 IPCEF1Q8WWN9 437 aaPredicted RBP14.69□□□□□ -0.06
VARS2-201ENST00000321897 ARNT2Q9HBZ2 717 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 ZCCHC3Q9NUD5 404 aaKnown RBP14.69□□□□□ -0.06
VARS2-201ENST00000321897 GADD45GO95257 159 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 DHFRP00374 187 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 C8GP07360 202 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 EBLN1P0CF75 366 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 ETFAP13804 333 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 MLLT10P55197 1068 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 MC1RQ01726 317 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 CHMP1BQ7LBR1 199 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 RNF130Q86XS8 419 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 C12orf66Q96MD2 445 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 SORBS1Q9BX66 1292 aaKnown RBP14.69□□□□□ -0.06
VARS2-201ENST00000321897 MS4A12Q9NXJ0 267 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 UTS2RQ9UKP6 389 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 E7EQ34 232 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 IFNW1P05000 195 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 ACADMP11310 421 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 FBXW4P57775 412 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 HNRNPA0Q13151 305 aaKnown RBP14.69□□□□□ -0.06
VARS2-201ENST00000321897 ZNF181Q2M3W8 571 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 LAPTM4BQ86VI4 370 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 DCP2Q8IU60 420 aaKnown RBP14.69□□□□□ -0.06
VARS2-201ENST00000321897 FCGR1BQ92637 280 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 TBX5Q99593 518 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 UCK2Q9BZX2 261 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 GPN2Q9H9Y4 310 aaPredicted RBP14.69□□□□□ -0.06
VARS2-201ENST00000321897 KLHL28Q9NXS3 571 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 AP3M1Q9Y2T2 418 aa14.69□□□□□ -0.06
VARS2-201ENST00000321897 TGM5O43548 720 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 CAPNS1P04632 268 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 TCF3P15923 654 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 PFKLP17858 780 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 ZNF45Q02386 682 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 CSTF1Q05048 431 aaKnown RBP14.68□□□□□ -0.06
VARS2-201ENST00000321897 ALDH16A1Q8IZ83 802 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 OR5H6Q8NGV6 325 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 RASSF5Q8WWW0 418 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 MGLLQ99685 303 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 SLC2A11Q9BYW1 496 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 SLC7A5P2Q9GIP4 190 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 RSPH9Q9H1X1 276 aaPredicted RBP14.68□□□□□ -0.06
VARS2-201ENST00000321897 ZNF334Q9HCZ1 680 aaPredicted RBP14.68□□□□□ -0.06
VARS2-201ENST00000321897 NLKQ9UBE8 527 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 MAPRE3Q9UPY8 281 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 ORC5O43913 435 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 ALPLP05186 524 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 NTSP30990 170 aa14.68□□□□□ -0.06
VARS2-201ENST00000321897 TARDBPQ13148 414 aaKnown RBP eCLIP14.68□□□□□ -0.06
VARS2-201ENST00000321897 GRIN2CQ14957 1233 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms