RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 OR2W5A6NFC9 320 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 MAGEB17A8MXT2 336 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 C21orf140B9A014 251 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 MASP2O00187 686 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 PRPF4O43172 522 aaKnown RBP eCLIP7.44□□□□□ -1.221e-7■■■■□ 24.7
CDC42-201ENST00000315554 GALR3O60755 368 aaPredicted RBP7.44□□□□□ -1.22
CDC42-201ENST00000315554 TRIM13O60858 407 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 CLEC3AO75596 197 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 CREG1O75629 220 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 ETHE1O95571 254 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 OTCP00480 354 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 SERPINA6P08185 405 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 CD46P15529 392 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 CERS1P27544 350 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 PTPN4P29074 926 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 SERPINB3P29508 390 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 OTX2P32243 289 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 ETV4P43268 484 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 FOXA1P55317 472 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 TMPRSS3P57727 454 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 STXBP1P61764 594 aaKnown RBP7.44□□□□□ -1.22
CDC42-201ENST00000315554 PCDH1Q08174 1060 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 VAC14Q08AM6 782 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 LCP2Q13094 533 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 E2F2Q14209 437 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 NKG7Q16617 165 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 TTMPQ5BVD1 217 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 LIPMQ5VYY2 423 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 FAAH2Q6GMR7 532 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 MRPL14Q6P1L8 145 aaKnown RBP7.44□□□□□ -1.22
CDC42-201ENST00000315554 METTL2BQ6P1Q9 378 aaKnown RBP7.44□□□□□ -1.22
CDC42-201ENST00000315554 PRMT9Q6P2P2 845 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 FRMD7Q6ZUT3 714 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 GPRIN3Q6ZVF9 776 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 ABHD13Q7L211 337 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 OVCH1Q7RTY7 1134 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 UBE3DQ7Z6J8 389 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 LAS2Q8IYD9 372 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 AFAP1L2Q8N4X5 818 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 TTLQ8NG68 377 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 UBE2E3Q969T4 207 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 TLCD1Q96CP7 247 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 CCDC126Q96EE4 140 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 PEX11GQ96HA9 241 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 FRMD6Q96NE9 622 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 ZNF382Q96SR6 550 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 DPH2Q9BQC3 489 aaPredicted RBP7.44□□□□□ -1.22
CDC42-201ENST00000315554 NTMT1Q9BV86 223 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 MS4A8Q9BY19 250 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 PITHD1Q9GZP4 211 aaPredicted RBP7.44□□□□□ -1.22
CDC42-201ENST00000315554 REXO4Q9GZR2 422 aaKnown RBP7.44□□□□□ -1.22
CDC42-201ENST00000315554 STMN4Q9H169 189 aaPredicted RBP7.44□□□□□ -1.22
CDC42-201ENST00000315554 ELOVL6Q9H5J4 265 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 MID1IP1Q9NPA3 183 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 DMRT3Q9NQL9 472 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 ZNF446Q9NWS9 450 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 KCND3Q9UK17 655 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 TCFL5Q9UL49 500 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 CDC14AQ9UNH5 594 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 FIS1Q9Y3D6 152 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 TIMM22Q9Y584 194 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 PCDHGA11Q9Y5H2 935 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 PKD1L2Q7Z442 2459 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 CELSR3Q9NYQ7 3312 aa7.44□□□□□ -1.22
CDC42-201ENST00000315554 SCN3AQ9NY46 2000 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 TMEM120BA0PK00 339 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 ZNF891A8MT65 544 aaPredicted RBP7.43□□□□□ -1.22
CDC42-201ENST00000315554 FAM227AF5H4B4 570 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 H0YIV9 168 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 MANBAO00462 879 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 CHST10O43529 356 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 UGDHO60701 494 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 LYPLA1O75608 230 aaPredicted RBP7.43□□□□□ -1.22
CDC42-201ENST00000315554 CDC123O75794 336 aaPredicted RBP7.43□□□□□ -1.22
CDC42-201ENST00000315554 KLF7O75840 302 aaPredicted RBP7.43□□□□□ -1.22
CDC42-201ENST00000315554 NSA2O95478 260 aaKnown RBP7.43□□□□□ -1.22
CDC42-201ENST00000315554 PDYNP01213 254 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 CHRNGP07510 517 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 BPGMP07738 259 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 UMODP07911 640 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 RAB40ALP0C0E4 278 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 PIM1P11309 404 aaPredicted RBP7.43□□□□□ -1.22
CDC42-201ENST00000315554 CHN1P15882 459 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 MAPK1P28482 360 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 HMOX2P30519 316 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 HPDP32754 393 aaPredicted RBP7.43□□□□□ -1.22
CDC42-201ENST00000315554 PEX19P40855 299 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 FOLR3P41439 243 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 XCR1P46094 333 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 RAP1GDS1P52306 607 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 DNAJB13P59910 316 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 OCA2Q04671 838 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 KLC1Q07866 573 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 IFT88Q13099 833 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 RUNX2Q13950 521 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 FAM53BQ14153 422 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 HERC3Q15034 1050 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 DEFB109BQ30KR1 87 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 MFSD4BQ5TF39 518 aa7.43□□□□□ -1.22
CDC42-201ENST00000315554 KHDRBS2Q5VWX1 349 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms