RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TTLQ8NG68 377 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 OR2L5Q8NG80 312 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 DNAJB14Q8TBM8 379 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 ZNF473Q8WTR7 871 aaKnown RBP13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 METTL21AQ8WXB1 218 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 HAS2Q92819 552 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 CSF3RQ99062 836 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 MS4A8Q9BY19 250 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 RNF32Q9H0A6 362 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 EPS8L2Q9H6S3 715 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 MMP25Q9NPA2 562 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 ZNF180Q9UJW8 692 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 NFU1Q9UMS0 254 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 CYR61O00622 381 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 CLGNO14967 610 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 B4GALT2O60909 372 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 WDPCPO95876 746 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 FAM153BP0C7A2 387 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 MAOAP21397 527 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 STXBP1P61764 594 aaKnown RBP13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 BTN3A2P78410 334 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 UBAP2LQ14157 1087 aaKnown RBP13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 PCBP2Q15366 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 TLR1Q15399 786 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 UAP1Q16222 522 aaPredicted RBP13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 FAM153CQ494X1 144 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 ZNF324BQ6AW86 544 aaPredicted RBP13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 RPUSD3Q6P087 351 aaKnown RBP13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 KRT78Q8N1N4 520 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 ELP5Q8TE02 316 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 F2RL3Q96RI0 385 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 TAAR6Q96RI8 345 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 REXO4Q9GZR2 422 aaKnown RBP13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 TSPYL1Q9H0U9 437 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 KCMF1Q9P0J7 381 aa13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 C19orf25Q9UFG5 118 aaPredicted RBP13.7□□□□□ -0.22
PPP1CA-201ENST00000312989 URADA6NGE7 173 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 VPS4BO75351 444 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 H2AFYO75367 372 aaKnown RBP13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 SCELO95171 688 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 SIX3O95343 332 aaPredicted RBP13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 F10P00742 488 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 ABHD2P08910 425 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 RNH1P13489 461 aaKnown RBP13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 ICAM2P13598 275 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 JAK1P23458 1154 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 CERS1P27544 350 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 TYK2P29597 1187 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 PLA2G16P53816 162 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 IRF8Q02556 426 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 FAM83EQ2M2I3 478 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 BTBD16Q32M84 506 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 IRAK1BP1Q5VVH5 260 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 FCRLBQ6BAA4 426 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 GRHL2Q6ISB3 625 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 CEP128Q6ZU80 1094 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 CRLF3Q8IUI8 442 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 RNF175Q8N4F7 328 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 KIF2BQ8N4N8 673 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 FAM26EQ8N5C1 309 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 EFCAB3Q8N7B9 438 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 CEP112Q8N8E3 955 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 OR7G3Q8NG95 312 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 UHMK1Q8TAS1 419 aaKnown RBP13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 M1APQ8TC57 530 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 SLX1AQ9BQ83 275 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 NPLQ9BXD5 320 aaPredicted RBP13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 ZNF717Q9BY31 904 aaPredicted RBP13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 OPTCQ9UBM4 332 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 ZNF223Q9UK11 482 aaPredicted RBP13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 VPS4AQ9UN37 437 aa13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 PPIEQ9UNP9 301 aaKnown RBP13.69□□□□□ -0.22
PPP1CA-201ENST00000312989 USP9YO00507 2555 aaPredicted RBP13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 SEMA7AO75326 666 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 MYBL2P10244 700 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 PPP2R1BP30154 601 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 MSH2P43246 934 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 ALDH18A1P54886 795 aaKnown RBP13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 LIM2P55344 173 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 RAB38P57729 211 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 SKP1P63208 163 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 LAPTM5Q13571 262 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 EXT1Q16394 746 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 PFKFB4Q16877 469 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 ARMC10Q8N2F6 343 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 APCDD1LQ8NCL9 501 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 CNDP1Q96KN2 507 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 PTCHD1Q96NR3 888 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 PSMG3-AS1Q96PY0 264 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 LPAR4Q99677 370 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 L2HGDHQ9H9P8 463 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 PRDM9Q9NQV7 894 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 DAPP1Q9UN19 280 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 TSC22D4Q9Y3Q8 395 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 COPG1Q9Y678 874 aaKnown RBP13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 CPAMD8Q8IZJ3 1885 aa13.68□□□□□ -0.22
PPP1CA-201ENST00000312989 SCN3AQ9NY46 2000 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 A0A1B0GTL3 188 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 OR5H15A6NDH6 313 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 ANKDD1BA6NHY2 528 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms