RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 TLR6Q9Y2C9 796 aa17.34■□□□□ 0.37
SPSB4-201ENST00000310546 PRG3Q9Y2Y8 225 aaPredicted RBP17.34■□□□□ 0.37
SPSB4-201ENST00000310546 XIRP2A4UGR9 3374 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 BET1O15155 118 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 FFAR2O15552 330 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 LYRM1O43325 122 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 SUV39H1O43463 412 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 ORC5O43913 435 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 PLOD3O60568 738 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 NBNO60934 754 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 CCNB2O95067 398 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 MSL3P1P0C860 447 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 INPP1P49441 399 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 PCBP2Q15366 365 aaKnown RBP eCLIP17.33■□□□□ 0.37
SPSB4-201ENST00000310546 AANATQ16613 207 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 CPSF6Q16630 551 aaKnown RBP eCLIP17.33■□□□□ 0.37
SPSB4-201ENST00000310546 TTLL9Q3SXZ7 439 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 IQCCQ4KMZ1 466 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 C22orf42Q6IC83 251 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 FAM181AQ8N9Y4 354 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 POLR2J2Q9GZM3 115 aaKnown RBP17.33■□□□□ 0.37
SPSB4-201ENST00000310546 NUDT4Q9NZJ9 180 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 TMCC3Q9ULS5 477 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 PPT2Q9UMR5 302 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 STUB1Q9UNE7 303 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 VPS9D1Q9Y2B5 631 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 MAN2B2Q9Y2E5 1009 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 PTCH2Q9Y6C5 1203 aa17.33■□□□□ 0.37
SPSB4-201ENST00000310546 PCDH17O14917 1159 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 GPR182O15218 404 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 GPR39O43194 453 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 PROM1O43490 865 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 FGF1P05230 155 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 NUDT7P0C024 238 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 CFL1P23528 166 aaKnown RBP17.33■□□□□ 0.36
SPSB4-201ENST00000310546 TEKQ02763 1124 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 ZNF782Q6ZMW2 699 aaPredicted RBP17.33■□□□□ 0.36
SPSB4-201ENST00000310546 RNF180Q86T96 592 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 PTOV1Q86YD1 416 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 LGI4Q8N135 537 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 OR6C4Q8NGE1 309 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 DNAJB8Q8NHS0 232 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 B3GALT6Q96L58 329 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 FAM129BQ96TA1 746 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 SEC14L4Q9UDX3 406 aa17.33■□□□□ 0.36
SPSB4-201ENST00000310546 UPK3BL1B0FP48 263 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 UPK3BL2E5RIL1 263 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 CPSF4O95639 269 aaKnown RBP17.32■□□□□ 0.36
SPSB4-201ENST00000310546 GLUD1P00367 558 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 OPN1SWP03999 348 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 THP07101 528 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 SRCP12931 536 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 CAV3P56539 151 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 CDC42P60953 191 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 KCNJ10P78508 379 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 SPIBQ01892 262 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 PTGES3Q15185 160 aaKnown RBP17.32■□□□□ 0.36
SPSB4-201ENST00000310546 CTSL3PQ5NE16 218 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 SMARCD1Q96GM5 515 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 RIMKLBQ9ULI2 386 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 SEC14L5O43304 696 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 OR4Q2P0C623 313 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 HLA-DPA1P20036 260 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 ZXDBP98169 803 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 RHAGQ02094 409 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 P2RY14Q15391 338 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 ALFQ53S48 1182 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 GPR65Q8IYL9 337 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 EXOC2Q96KP1 924 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 DPCDQ9BVM2 203 aaPredicted RBP17.32■□□□□ 0.36
SPSB4-201ENST00000310546 ELOVL6Q9H5J4 265 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 BPIFA1Q9NP55 256 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 CLN6Q9NWW5 311 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 PLEKHB1Q9UF11 243 aaPredicted RBP17.32■□□□□ 0.36
SPSB4-201ENST00000310546 POFUT2Q9Y2G5 429 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 CEP290O15078 2479 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 SZT2Q5T011 3432 aa17.32■□□□□ 0.36
SPSB4-201ENST00000310546 INMT-MINDY4F8WBC2 141 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 FPGTO14772 594 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 CSO75390 466 aaKnown RBP17.31■□□□□ 0.36
SPSB4-201ENST00000310546 GATMP50440 423 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 RPA4Q13156 261 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 MBTPS1Q14703 1052 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 SNAPC1Q16533 368 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 SPDYE7PQ495Y7 208 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 ZRANB3Q5FWF4 1079 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 DGKKQ5KSL6 1271 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 GLT6D1Q7Z4J2 308 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 TRIM69Q86WT6 500 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 CHD7Q9P2D1 2997 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 ZNF222Q9UK12 451 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 ING4Q9UNL4 249 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 ISM1B1AKI9 464 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 LOC730098B7Z3J9 87 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 B4GALT3O60512 393 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 SDC2P34741 201 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 ABATP80404 500 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 HKDC1Q2TB90 917 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 ERICH5Q6P6B1 374 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 AFTPHQ6ULP2 937 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms