RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 ORC5O43913 435 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 TPST2O60704 377 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 SNAI1O95863 264 aaPredicted RBP18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 PIPP12273 146 aaPredicted RBP18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 ARSBP15848 533 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 NAGAP17050 411 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 MAPKAPK2P49137 400 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 CASP9P55211 416 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 RAB25P57735 213 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 IFI44LQ53G44 452 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 HSDL2Q6YN16 418 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 GPR155Q7Z3F1 870 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 GPR65Q8IYL9 337 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 C9orf62Q8N4C0 152 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 CLDN22Q8N7P3 220 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 SLC37A3Q8NCC5 494 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 UBTD2Q8WUN7 234 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 KIAA1143Q96AT1 154 aaPredicted RBP18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 HHIPQ96QV1 700 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 TCF25Q9BQ70 676 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 TRAF4Q9BUZ4 470 aaPredicted RBP18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 ADGRE3Q9BY15 652 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 MCOLN1Q9GZU1 580 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 PPIL3Q9H2H8 161 aaKnown RBP18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 ANKRA2Q9H9E1 313 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 DNAJC27Q9NZQ0 273 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 STOML2Q9UJZ1 356 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 PATJQ8NI35 1801 aa18.12■□□□□ 0.49
CHRNB1-201ENST00000306071 SCN2BO60939 215 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 ZNF7P17097 686 aaPredicted RBP18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 AMD1P17707 334 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 C1DQ13901 141 aaKnown RBP18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 PHC2Q8IXK0 858 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 AQP11Q8NBQ7 271 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 C11orf65Q8NCR3 313 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 FAM46DQ8NEK8 389 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 ZIC5Q96T25 663 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 AIFM2Q9BRQ8 373 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 FAM105AQ9NUU6 356 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 FAM120CQ9NX05 1096 aaKnown RBP18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 LINC00862A6NCI5 91 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 LYRM1O43325 122 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 LGI1O95970 557 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 HBQ1P09105 142 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 MSL3P1P0C860 447 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 HOXD9P28356 352 aaPredicted RBP18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 CRISP1P54107 249 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 ALDH6A1Q02252 535 aaKnown RBP18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 ZNF267Q14586 743 aaPredicted RBP18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 CDH24Q86UP0 819 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 NAGSQ8N159 534 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 RNF175Q8N4F7 328 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 DUSP18Q8NEJ0 188 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 CSGALNACT1Q8TDX6 532 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 MSANTD3Q96H12 275 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 MAGEB10Q96LZ2 347 aaPredicted RBP18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 KATNBL1Q9H079 304 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 COMMD3Q9UBI1 195 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 RABL2AQ9UBK7 228 aaPredicted RBP18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 AFF4Q9UHB7 1163 aaKnown RBP18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 ENOPH1Q9UHY7 261 aa18.11■□□□□ 0.49
CHRNB1-201ENST00000306071 ZAR1LA6NP61 321 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 YY2O15391 372 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 HCN1O60741 890 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 GCM2O75603 506 aaPredicted RBP18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 RFPL3O75679 317 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 POMCP01189 267 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 LAMP1P11279 417 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 ACPPP15309 386 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 EPORP19235 508 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 SDC2P34741 201 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 PCGF2P35227 344 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 INPP1P49441 399 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 GANABQ14697 944 aaKnown RBP18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 SUZ12Q15022 739 aaKnown RBP18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 ANGPT1Q15389 498 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 RGNQ15493 299 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 ANKRD54Q6NXT1 300 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 SERPINA9Q86WD7 417 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 TIGD4Q8IY51 512 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 SLC43A3Q8NBI5 491 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 AKAP1Q92667 903 aaKnown RBP eCLIP18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 ZC3HAV1LQ96H79 300 aaKnown RBP18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 KCNE2Q9Y6J6 123 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 PCDH7O60245 1069 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 IGHA2P01877 340 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 ZNF250P15622 560 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 GPR15P49685 360 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 PER3P56645 1201 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 CLDN20P56880 219 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 TEAD4Q15561 434 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 HKDC1Q2TB90 917 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 FRMPD2BQ6IN97 320 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 FAM151BQ6UXP7 276 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 ZBTB2Q8N680 514 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 PHF21AQ96BD5 680 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 SLC32A1Q9H598 525 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 ARL15Q9NXU5 204 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 FTSJ1Q9UET6 329 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 SCML2Q9UQR0 700 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms