RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 RAB8AP61006 207 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 PHEXP78562 749 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 IL5RAQ01344 420 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 RPS26P11Q5JNZ5 115 aaPredicted RBP13.92□□□□□ -0.18
SMG8-201ENST00000300917 KHDRBS2Q5VWX1 349 aaKnown RBP13.92□□□□□ -0.18
SMG8-201ENST00000300917 CPZQ66K79 652 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 OR2T5Q6IEZ7 315 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 FAM71E1Q6IPT2 247 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 Q6ZPB1 254 aaPredicted RBP13.92□□□□□ -0.18
SMG8-201ENST00000300917 BPIFB6Q8NFQ5 453 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 OR2T29Q8NH02 315 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 UBE2FQ969M7 185 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 APOOQ9BUR5 198 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 PADI4Q9UM07 663 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 PLXND1Q9Y4D7 1925 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 MYO10Q9HD67 2058 aa13.92□□□□□ -0.18
SMG8-201ENST00000300917 ISM1B1AKI9 464 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 TMPRSS11DO60235 418 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 RPN2P04844 631 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 TRIM23P36406 574 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 PRKAG1P54619 331 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 MANFP55145 182 aaKnown RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 PPP2R2BQ00005 443 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 ZNF750Q32MQ0 723 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 SFTPA2Q8IWL1 248 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 FBXL6Q8N531 539 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 OR5K1Q8NHB7 308 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 LMAN2LQ9H0V9 348 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 ATAD3AQ9NVI7 634 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 KIF17Q9P2E2 1029 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 RHCGQ9UBD6 479 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 CEPT1Q9Y6K0 416 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 HEATR5BQ9P2D3 2071 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 COL4A3Q01955 1670 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 A0A087WXM4 84 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 SUV39H1O43463 412 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 XPNPEP2O43895 674 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 ERAL1O75616 437 aaKnown RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 C8orf89P0DMQ9 161 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 ACADMP11310 421 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 IGFBP5P24593 272 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 PMS2P3Q13401 168 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 TP53BP2Q13625 1128 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 SPDYE7PQ495Y7 208 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 DEPDC1Q5TB30 811 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 GPR107Q5VW38 600 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 GALNT18Q6P9A2 607 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 KCTD8Q6ZWB6 473 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 C8orf59Q8N0T1 100 aaPredicted RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 C11orf65Q8NCR3 313 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMG8-201ENST00000300917 SETD7Q8WTS6 366 aaKnown RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 MENTQ9BUN1 341 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 NAA50Q9GZZ1 169 aaKnown RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 S1PR5Q9H228 398 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 CXorf36Q9H7Y0 433 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 RASSF1Q9NS23 344 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 EBF1Q9UH73 591 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 BTNL2Q9UIR0 455 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 SCN3AQ9NY46 2000 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 IGKV1-8A0A0C4DH67 115 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 J3KTA2 159 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 CACNB4O00305 520 aaPredicted RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 FOXD2O60548 495 aaPredicted RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 GCM2O75603 506 aaPredicted RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 SLC5A2P31639 672 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 SSR2P43308 183 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 RPA4Q13156 261 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 ADAM15Q13444 863 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 CTU2Q2VPK5 515 aaKnown RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 R3HCC1LQ7Z5L2 792 aaKnown RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 DCP2Q8IU60 420 aaKnown RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 SYNPOQ8N3V7 929 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 RPLP0P6Q8NHW5 317 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 HMGB4Q8WW32 186 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 RBM4BQ9BQ04 359 aaKnown RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 YIPF4Q9BSR8 244 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 RBM4Q9BWF3 364 aaKnown RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 C1QTNF2Q9BXJ5 285 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 RBM38Q9H0Z9 239 aaKnown RBP13.91□□□□□ -0.18
SMG8-201ENST00000300917 IL1RAPQ9NPH3 570 aa13.91□□□□□ -0.18
SMG8-201ENST00000300917 RNASET2O00584 256 aaKnown RBP13.9□□□□□ -0.18
SMG8-201ENST00000300917 FESP07332 822 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 POU2F1P14859 743 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 CDH2P19022 906 aaPredicted RBP13.9□□□□□ -0.18
SMG8-201ENST00000300917 RRM2P31350 389 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 EIF2DP41214 584 aaKnown RBP13.9□□□□□ -0.18
SMG8-201ENST00000300917 CSNK1G2P78368 415 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 SCARB2Q14108 478 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 GANABQ14697 944 aaKnown RBP13.9□□□□□ -0.18
SMG8-201ENST00000300917 GPR141Q7Z602 305 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 KLHDC8AQ8IYD2 350 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 DOK4Q8TEW6 326 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 STARD8Q92502 1023 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 UBE2E3Q969T4 207 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 WDR34Q96EX3 536 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 DPH7Q9BTV6 452 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 BTBD1Q9H0C5 482 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 CD320Q9NPF0 282 aa13.9□□□□□ -0.18
SMG8-201ENST00000300917 TAS2R9Q9NYW1 312 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms