RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 ZCCHC18P0CG32 403 aa24.44■■□□□ 1.5
SDCCAG3-201ENST00000298537 HNRNPFP52597 415 aaKnown RBP24.44■■□□□ 1.5
SDCCAG3-201ENST00000298537 ANGPTL8Q6UXH0 198 aa24.44■■□□□ 1.5
SDCCAG3-201ENST00000298537 NAGSQ8N159 534 aa24.44■■□□□ 1.5
SDCCAG3-201ENST00000298537 CATSPER1Q8NEC5 780 aa24.44■■□□□ 1.5
SDCCAG3-201ENST00000298537 RGMAQ96B86 450 aa24.44■■□□□ 1.5
SDCCAG3-201ENST00000298537 DCAF13Q9NV06 445 aaKnown RBP24.44■■□□□ 1.5
SDCCAG3-201ENST00000298537 UBAP1Q9NZ09 502 aa24.44■■□□□ 1.5
SDCCAG3-201ENST00000298537 MAGED1Q9Y5V3 778 aaPredicted RBP24.44■■□□□ 1.5
SDCCAG3-201ENST00000298537 GPR37L1O60883 481 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 CLEC3AO75596 197 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 CMPK1P30085 196 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 MVDP53602 400 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 ZIC1Q15915 447 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 SERPINA11Q86U17 422 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 CENPNQ96H22 339 aaPredicted RBP24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 NTN4Q9HB63 628 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 GPR27Q9NS67 375 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 RAPGEFL1Q9UHV5 662 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 OR6C74A6NCV1 312 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 SCELO95171 688 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 MAGP20916 626 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 MED21Q13503 144 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 LRRC23Q53EV4 343 aaPredicted RBP24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 OR4C11Q6IEV9 310 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 TBPL2Q6SJ96 375 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 NUDT13Q86X67 352 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 OR8K5Q8NH50 307 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 TRAPPC9Q96Q05 1148 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 BTBD9Q96Q07 612 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 CHST8Q9H2A9 424 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 APOBEC3BQ9UH17 382 aaKnown RBP24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 VPS4AQ9UN37 437 aa24.43■■□□□ 1.5
SDCCAG3-201ENST00000298537 IST1P53990 364 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 RAB8AP61006 207 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 ABATP80404 500 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 PPP1R8Q12972 351 aaKnown RBP24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 ATP6AP1Q15904 470 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 VMACQ2NL98 169 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 TMEM214Q6NUQ4 689 aaKnown RBP24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 R3HCC1LQ7Z5L2 792 aaKnown RBP24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 TAF8Q7Z7C8 310 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 TRIM48Q8IWZ4 208 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 SYNPOQ8N3V7 929 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 SLC37A2Q8TED4 501 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 MS4A6EQ96DS6 147 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 VPS50Q96JG6 964 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 OR2A14Q96R47 310 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 PCDHGA4Q9Y5G9 962 aa24.42■■□□□ 1.5
SDCCAG3-201ENST00000298537 DLGAP1O14490 977 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 ERI3O43414 337 aaKnown RBP24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 DDCP20711 480 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 NDUFS1P28331 727 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 PTGER1P34995 402 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 GRK3P35626 688 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 SSR2P43308 183 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 BLMHQ13867 455 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 RGNQ15493 299 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 FAM47BQ8NA70 645 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 TNIP2Q8NFZ5 429 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 SLC47A1Q96FL8 570 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 SLC35A5Q9BS91 424 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 PITHD1Q9GZP4 211 aaPredicted RBP24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 ATAD3AQ9NVI7 634 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 CPNE7Q9UBL6 633 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 DMTF1Q9Y222 760 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 A0A1W2PRB8 838 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 GSAPA4D1B5 854 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 GLOD5A6NK44 160 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 UPK1AO00322 258 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 RAP2AP10114 183 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 ETFAP13804 333 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 STARD6P59095 220 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 PPP1CAP62136 330 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 KCT2Q8NC54 265 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 EXOSC8Q96B26 276 aaKnown RBP24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 KLHDC7BQ96G42 594 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 ZNF597Q96LX8 424 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 CNBD2Q96M20 576 aa24.41■■□□□ 1.5
SDCCAG3-201ENST00000298537 A0A0A6YYD5 115 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 UGT2B7P16662 529 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 AQP1P29972 269 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 LSSP48449 732 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 CHRNB3Q05901 458 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 PDK3Q15120 406 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 FAM98BQ52LJ0 330 aaKnown RBP24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 TOR1AIP1Q5JTV8 583 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 VN1R4Q7Z5H5 301 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 PAQR7Q86WK9 346 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 CXorf36Q9H7Y0 433 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 DDX31Q9H8H2 851 aaKnown RBP24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 CNOT11Q9UKZ1 510 aaKnown RBP24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 AP1M2Q9Y6Q5 423 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 VIPP01282 170 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 PVRP15151 417 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 RGS19P49795 217 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 CRYBA2P53672 197 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 CPZQ66K79 652 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 PPP4R4Q6NUP7 873 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms