RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ZNF860A6NHJ4 632 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 AGPSO00116 658 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 FFAR3O14843 346 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 TM9SF1O15321 606 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 GPR42O15529 346 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 CHST10O43529 356 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 ESRRBO95718 433 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 ENO1P06733 434 aaKnown RBP25.42■■□□□ 1.66
SSU72-201ENST00000291386 TSFMP43897 325 aaKnown RBP25.42■■□□□ 1.66
SSU72-201ENST00000291386 XCR1P46094 333 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 PLA2G16P53816 162 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 RPS13P62277 151 aaKnown RBP25.42■■□□□ 1.66
SSU72-201ENST00000291386 IFT88Q13099 833 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 DDX39BQ13838 428 aaKnown RBP25.42■■□□□ 1.66
SSU72-201ENST00000291386 CFAP157Q5JU67 520 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 TTC19Q6DKK2 380 aaPredicted RBP25.42■■□□□ 1.66
SSU72-201ENST00000291386 HDXQ7Z353 690 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 RNF175Q8N4F7 328 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 AGAP11Q8TF27 550 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 TTC9Q92623 222 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 PKNOX2Q96KN3 472 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 SERINC2Q96SA4 455 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 GATA5Q9BWX5 397 aaPredicted RBP25.42■■□□□ 1.66
SSU72-201ENST00000291386 NUP210LQ5VU65 1888 aa25.42■■□□□ 1.66
SSU72-201ENST00000291386 PCDH17O14917 1159 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 DNAJB6O75190 326 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 SCELO95171 688 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 NEK2P51955 445 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 MTTPP55157 894 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 PPP1R32Q7Z5V6 425 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 LAPTM4BQ86VI4 370 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 CA13Q8N1Q1 262 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 TLCD1Q96CP7 247 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 CNDP1Q96KN2 507 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 CENPKQ9BS16 269 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 TRMOQ9BU70 441 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 CRB3Q9BUF7 120 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 OR51B5Q9H339 312 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 ELOVL6Q9H5J4 265 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 VIPAS39Q9H9C1 493 aa25.41■■□□□ 1.66
SSU72-201ENST00000291386 UBFD1O14562 309 aaKnown RBP25.4■■□□□ 1.66
SSU72-201ENST00000291386 BPGMP07738 259 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 OTX2P32243 289 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 ZNF33BQ06732 778 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 TBR1Q16650 682 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 DEFB109BQ30KR1 87 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 SHISA6Q6ZSJ9 500 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 MRGPREQ86SM8 312 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 SHISA5Q8N114 240 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 RGMAQ96B86 450 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 ZBTB9Q96C00 473 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 SERPINI1Q99574 410 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 BRF2Q9HAW0 419 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 MID1IP1Q9NPA3 183 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 C3orf18Q9UK00 162 aa25.4■■□□□ 1.66
SSU72-201ENST00000291386 A0A0G2JN53 185 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 IDSB3KWA1 339 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 B3GALT2O43825 422 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 ZWINTO95229 277 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 DHRS4L1P0CG22 281 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 EMP2P54851 167 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 OLR1P78380 273 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 RUNX2Q13950 521 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 BORAQ6PGQ7 559 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 CDYL2Q8N8U2 506 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 METTL6Q8TCB7 284 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 TBC1D20Q96BZ9 403 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 PEX11GQ96HA9 241 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 MECRQ9BV79 373 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 COPS7BQ9H9Q2 264 aaPredicted RBP25.39■■□□□ 1.66
SSU72-201ENST00000291386 HS3ST3B1Q9Y662 390 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 KCNMB2Q9Y691 235 aa25.39■■□□□ 1.66
SSU72-201ENST00000291386 PCSK5Q92824 1860 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 ERVH48-1M5A8F1 160 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 SOCS6O14544 535 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 NPHS1O60500 1241 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 JRKO75564 520 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 SEMA3DO95025 777 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 ETHE1O95571 254 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 PDYNP01213 254 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 KRT6AP02538 564 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 KRT6BP04259 564 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 RNH1P13489 461 aaKnown RBP25.38■■□□□ 1.65
SSU72-201ENST00000291386 ATP5A1P25705 553 aaKnown RBP25.38■■□□□ 1.65
SSU72-201ENST00000291386 KRT6CP48668 564 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 SLC18A1P54219 525 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 GALNT1Q10472 559 aaPredicted RBP25.38■■□□□ 1.65
SSU72-201ENST00000291386 AP5B1Q2VPB7 878 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 TUBB8Q3ZCM7 444 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 AGBL2Q5U5Z8 902 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 OR4C11Q6IEV9 310 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 ZNF793Q6ZN11 406 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 APLFQ8IW19 511 aaPredicted RBP25.38■■□□□ 1.65
SSU72-201ENST00000291386 PRSS58Q8IYP2 241 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 OR6Y1Q8NGX8 325 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 ADAMTS18Q8TE60 1221 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 APOBEC4Q8WW27 367 aaKnown RBP25.38■■□□□ 1.65
SSU72-201ENST00000291386 SELENOMQ8WWX9 145 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 SREK1Q8WXA9 508 aaKnown RBP25.38■■□□□ 1.65
SSU72-201ENST00000291386 MTFMTQ96DP5 389 aaKnown RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms