RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 NUP188Q5SRE5 1749 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 TLR4O00206 839 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 SOX1O00570 391 aaPredicted RBP17.85■□□□□ 0.45
PCDH1-201ENST00000287008 HCRTR2O43614 444 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 JUPP14923 745 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 ETS2P15036 469 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 AOC1P19801 751 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 KCNC4Q03721 635 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 LPAL2Q16609 132 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 TTLL10Q6ZVT0 673 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 CYS1Q717R9 158 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 GALNTL5Q7Z4T8 443 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 CHCHD4Q8N4Q1 142 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 UCK2Q9BZX2 261 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 C14orf105Q9NVL8 296 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 TNFRSF10DQ9UBN6 386 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 ING4Q9UNL4 249 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 C1orf226A1L170 272 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 ALDOAP04075 364 aaKnown RBP17.84■□□□□ 0.45
PCDH1-201ENST00000287008 IL18R1Q13478 541 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 RAB6CQ53S08 254 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 UNC5DQ6UXZ4 953 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 GALNT12Q8IXK2 581 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 KLHL36Q8N4N3 616 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 RPLP0P6Q8NHW5 317 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.84■□□□□ 0.45
PCDH1-201ENST00000287008 F2RL3Q96RI0 385 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 RAB6CQ9H0N0 254 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 PDCD5O14737 125 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 IL3P08700 152 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 C9orf43Q8TAL5 461 aaPredicted RBP17.84■□□□□ 0.45
PCDH1-201ENST00000287008 EZH1Q92800 747 aaPredicted RBP17.84■□□□□ 0.45
PCDH1-201ENST00000287008 PYURFQ96I23 114 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 HSH2DQ96JZ2 352 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 CMKLR1Q99788 373 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 MGME1Q9BQP7 344 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 IFI30P13284 250 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 NR4A1P22736 598 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 DSC1Q08554 894 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 PTGR1Q14914 329 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 TMEM35AQ53FP2 167 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 SATL1Q86VE3 508 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 PNLDC1Q8NA58 520 aaKnown RBP17.84■□□□□ 0.45
PCDH1-201ENST00000287008 CCDC54Q8NEL0 328 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 ADAD1Q96M93 576 aaKnown RBP17.84■□□□□ 0.45
PCDH1-201ENST00000287008 G6PC3Q9BUM1 346 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 GPN1Q9HCN4 374 aaPredicted RBP17.84■□□□□ 0.45
PCDH1-201ENST00000287008 ZNF304Q9HCX3 659 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 ZFR2Q9UPR6 939 aaKnown RBP17.84■□□□□ 0.45
PCDH1-201ENST00000287008 GRXCR1A8MXD5 290 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 UQCRC2P22695 453 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 TXNL4AP83876 142 aaKnown RBP17.84■□□□□ 0.45
PCDH1-201ENST00000287008 MERTKQ12866 999 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 QSOX2Q6ZRP7 698 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 RABEPKQ7Z6M1 372 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 TMEM130Q8N3G9 435 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 CPXM2Q8N436 756 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 TMBIM1Q969X1 311 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 GORASP1Q9BQQ3 440 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 TSSK6Q9BXA6 273 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 LGR4Q9BXB1 951 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 PLCL2Q9UPR0 1127 aa17.84■□□□□ 0.45
PCDH1-201ENST00000287008 EIF3FO00303 357 aaPredicted RBP17.83■□□□□ 0.45
PCDH1-201ENST00000287008 SOX30O94993 753 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 SLC35E2BP0CK96 405 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 ADAM8P78325 824 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 TRAM2Q15035 370 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 OR52E8Q6IFG1 317 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 RNF111Q6ZNA4 994 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 NSUN5Q96P11 429 aaKnown RBP17.83■□□□□ 0.45
PCDH1-201ENST00000287008 ALPK1Q96QP1 1244 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 LIPT1Q9Y234 373 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 PSMD9O00233 223 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 CSTAP01040 98 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 PROS1P07225 676 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 EN2P19622 333 aaPredicted RBP17.83■□□□□ 0.45
PCDH1-201ENST00000287008 TCTE1Q5JU00 501 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 FIGLAQ6QHK4 219 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 NXPE4Q6UWF7 544 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 HTR3DQ70Z44 454 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 CEP97Q8IW35 865 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 IFT52Q9Y366 437 aa17.83■□□□□ 0.45
PCDH1-201ENST00000287008 ABLIM1O14639 778 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 GABRA3P34903 492 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 PXNP49023 591 aaPredicted RBP17.83■□□□□ 0.44
PCDH1-201ENST00000287008 AFF1P51825 1210 aaKnown RBP17.83■□□□□ 0.44
PCDH1-201ENST00000287008 AQP4P55087 323 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 GSCP56915 257 aaPredicted RBP17.83■□□□□ 0.44
PCDH1-201ENST00000287008 CYBRD1Q53TN4 286 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 PDPRQ8NCN5 879 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 LPAR4Q99677 370 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 MAPKAP1Q9BPZ7 522 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 MARCH7Q9H992 704 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 B4GALT7Q9UBV7 327 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 RBBP4Q09028 425 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 RPA4Q13156 261 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 C5orf22Q49AR2 442 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 KCTD8Q6ZWB6 473 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 TAS1R1Q7RTX1 841 aa17.83■□□□□ 0.44
PCDH1-201ENST00000287008 PRAMEF26H0Y7S4 382 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 283.9 ms